Parental gene: | CFL2, ENSEEUG00000013155 |
| Aliases: | None |
| Description: | cofilin 2 (muscle) [Source:HGNC Symbol;Acc:1875] |
| Organism: | Hedgehog (Erinaceus europaeus) |
| Coordinates: | GeneScaffold_6361:7781..8496(-) |
>ENSEEUG00000013155
GCTTCTGGAGTCACAGTGAATGATGAAGTCATCAAAGTTTTTAATGATATGAAAGTCAGGAAATCTTCGACGCAAGAGGA
GATCAAAAAAAGAAAGAAAGCTGTTCTCTTCTGTTTAAGCGATGACAAAAGACAAATAATTGTAGAGGAAGCGAAGCAGA
TCTTGGTGGGTGACATTGGTGATACTGTAGAGGACCCCTACACAGCTTTTGTGAAGTTGCTACCTCTGAATGATTGCCGA
TATGCATTGTACGATGCCACATACGAAACAAAAGAGTCTAAGAAGGAAGACCTAGTATTTATATTCTGGGCGCCTGAAAG
TGCACCTTTAAAAAGCAAGATGATTTATGCTAGCTCTAAAGATGCCATTAAAAAGAAATTTACAGGTATTAAGCACGAGT
GGCAAGTAAATGGCTTGGATGACATAAAGGATCGCTCGACCCTGGGCGAGAAATTGGGAGGCAATGTTGTAGTTTCACTT
GAAGGAAAACCCTTATAA
GCTTCTGGAGTCACAGTGAATGATGAAGTCATCAAAGTTTTTAATGATATGAAAGTCAGGAAATCTTCGACGCAAGAGGA
GATCAAAAAAAGAAAGAAAGCTGTTCTCTTCTGTTTAAGCGATGACAAAAGACAAATAATTGTAGAGGAAGCGAAGCAGA
TCTTGGTGGGTGACATTGGTGATACTGTAGAGGACCCCTACACAGCTTTTGTGAAGTTGCTACCTCTGAATGATTGCCGA
TATGCATTGTACGATGCCACATACGAAACAAAAGAGTCTAAGAAGGAAGACCTAGTATTTATATTCTGGGCGCCTGAAAG
TGCACCTTTAAAAAGCAAGATGATTTATGCTAGCTCTAAAGATGCCATTAAAAAGAAATTTACAGGTATTAAGCACGAGT
GGCAAGTAAATGGCTTGGATGACATAAAGGATCGCTCGACCCTGGGCGAGAAATTGGGAGGCAATGTTGTAGTTTCACTT
GAAGGAAAACCCTTATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 0 .80 RPM |
| SRP017611_kidney | 8 .25 RPM |
| SRP017611_brain | 26 .59 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Dasypus novemcinctus | ENSDNOG00000017048 | ortholog_one2one | 7 retrogenes | |
| Erinaceus europaeus | ENSEEUG00000011893 | within_species_paralog | 1 retrogene | |
| Echinops telfairi | ENSETEG00000006010 | possible_ortholog | 3 retrogenes | |
| Latimeria chalumnae | ENSLACG00000018011 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000000739 | ortholog_one2one | 11 retrogenes | |
| Monodelphis domestica | ENSMODG00000012949 | ortholog_one2many | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000009383 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000004732 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000000391 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_eeur_335 | 75.15 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_eeur_448 | 61.15 | 94.55 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_eeur_513 | 73.15 | 65.45 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_eeur_578 | 67.36 | 87.27 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSEEUG00000013155 retrocopies