Parental gene: | CAPZB, ENSDNOG00000018644 |
| Aliases: | None |
| Description: | capping protein (actin filament) muscle Z-line, beta [Source:HGNC Symbol;Acc:1491] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_686:3876..132129(-) |
>ENSDNOG00000018644
ATGCCCACTAAGTTCCAGGATACAGTGTTCTCCCACACAGGCCATGGCCCCAGAAAATGTGATCCAGAACCTAGAAGGAG
TGATCAGCAGCTGGACTGTGCCTTGGACTTAATGAGGCGCCTGCCTCCACAGCAAATTGAGAAAAACCTCAGCGACCTGA
TCGACCTGGTCCCCAGTCTATGTGAAGATCTCCTGTCTTCTGTTGATCAGCCTCTGAAAATCGCCAGAGACAAGGTGGTG
GGAAAAGATTACCTTTTGTGTGACTACAACAGAGATGGGGACTCTTATAGGTCACCATGGAGTAACAAGTATGACCCACC
GTTGGAAGATGGGGCCATGCCGTCTGCTCGGCTGCGAAAGCTGGAGGTGGAAGCCAATAATGCCTTTGACCAGTATCGAG
ACCTGTATTTTGAAGGTGGCGTCTCCTCTGTCTACCTCTGGGATCTGGATCATGGCTTTGCTGGAGTGATCCTCATAAAG
AAGGCTGGAGATGGATCAAAGAAGATCAAAGGCTGCTGGGATTCCATCCATGTGGTGGAAGTGCAGGAGAAATCCAGTGG
TCGTACTGCCCATTATAAGTTGACCTCCACGGTGATGCTGTGGCTGCAAACCAACAAATCCGGCTCTGGCACCATGAACC
TTGGAGGCAGCCTTACCAGACAGATGGAGAAAGATGAAGGTGTGAACGACTCCTCCCCACACATAGCCCACATTGGGCGC
CTGGTGGAGGACATGGAGAATAAAATCAGAAGTACGCTGAATGAGATCTACTTTGGAAAAACAAAGGGCATCGTTAATGG
TCTG
ATGCCCACTAAGTTCCAGGATACAGTGTTCTCCCACACAGGCCATGGCCCCAGAAAATGTGATCCAGAACCTAGAAGGAG
TGATCAGCAGCTGGACTGTGCCTTGGACTTAATGAGGCGCCTGCCTCCACAGCAAATTGAGAAAAACCTCAGCGACCTGA
TCGACCTGGTCCCCAGTCTATGTGAAGATCTCCTGTCTTCTGTTGATCAGCCTCTGAAAATCGCCAGAGACAAGGTGGTG
GGAAAAGATTACCTTTTGTGTGACTACAACAGAGATGGGGACTCTTATAGGTCACCATGGAGTAACAAGTATGACCCACC
GTTGGAAGATGGGGCCATGCCGTCTGCTCGGCTGCGAAAGCTGGAGGTGGAAGCCAATAATGCCTTTGACCAGTATCGAG
ACCTGTATTTTGAAGGTGGCGTCTCCTCTGTCTACCTCTGGGATCTGGATCATGGCTTTGCTGGAGTGATCCTCATAAAG
AAGGCTGGAGATGGATCAAAGAAGATCAAAGGCTGCTGGGATTCCATCCATGTGGTGGAAGTGCAGGAGAAATCCAGTGG
TCGTACTGCCCATTATAAGTTGACCTCCACGGTGATGCTGTGGCTGCAAACCAACAAATCCGGCTCTGGCACCATGAACC
TTGGAGGCAGCCTTACCAGACAGATGGAGAAAGATGAAGGTGTGAACGACTCCTCCCCACACATAGCCCACATTGGGCGC
CTGGTGGAGGACATGGAGAATAAAATCAGAAGTACGCTGAATGAGATCTACTTTGGAAAAACAAAGGGCATCGTTAATGG
TCTG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 80 .70 RPM |
| SRP012922_cerebellum | 51 .14 RPM |
| SRP012922_heart | 34 .57 RPM |
| SRP012922_kidney | 36 .69 RPM |
| SRP012922_liver | 27 .71 RPM |
| SRP012922_lung | 65 .82 RPM |
| SRP012922_quadricep_muscle | 61 .79 RPM |
| SRP012922_spleen | 97 .06 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000006715 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000002018 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000012115 | ortholog_one2one | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000014711 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_1168 | 91.74 | 90.30 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_dnov_1719 | 72.38 | 88.06 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_dnov_2663 | 76.95 | 90.30 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000018644 retrocopies