Parental gene: | Pogk, ENSDORG00000006822 |
| Aliases: | None |
| Description: | pogo transposable element with KRAB domain [Source:MGI Symbol;Acc:MGI:1918842] |
| Organism: | Kangaroo rat (Dipodomys ordii) |
| Coordinates: | GeneScaffold_3510:8105..17352(+) |
>ENSDORG00000006822
ATGGAGTCTACAACCTACCCTCTCAATTTGACCCTGAAAGAAGAAGAGGAAGAAGAAGAGATTCAGTGCCGGGAACTGAA
GGATGGCCCAACCGATATGCAAAAAGTACGAATCTGCTCAGAAGGTGGATGGGTTCCAGCCCTATTTGATGAGGTGGCCA
TATATTTTTCTGATGAGGAGTGGGAAGTTTTGACGGACCAACAAAAGGCCCTCTACCGGGAAGTCATGAGGATGAATTAT
GAAACTGTTCTATCCCTGGAATTCCCATTCCCTAAGCCAGACATGATCACTCGTTTGGAACGGGAGGAAGAGTCTCATAA
TTCTGAGGAGTGGCAGCTACAAGGAGGACCCGTTACAGAAAATGAAGAATCTGATGTGAAGTCTCCAGATTGGGCAACCC
CCATGAATACCACCTCCCACTTCCCTCAGCCTCAGCATCTTGACAGCTTTGGCCTGCGCCTGCCTCGGGACATCACTGAG
CTGCCTGAATGGAGTGAGGGGTACCCCTTCTGCATGGCCATGGGCTTCCCGGGGTACGACCTCTCGGCTGATGACATAGC
TGGGAAGTTTCAGTTCAGCCGGGGCATGCGCCGCAGTTACGACGCAGGATTCAAGTTGATGGTGGTAGAGTATGCCGAGA
GCACCAACAACTGCCAGGCTGCCAAGCAGTTTGGAGTATTCGAAAAAAACGTTCGAGACTGGCGCAAGGTGAAGCCACAG
CTGCAGAATGCCCATGCCATGCGACGGGCATTCCGAGGCCCCAAGAATGGCAGGTTTGCTCTGGTGGACCAACGCGTGGC
TGAGTATGTCAGATACATGCAGGCCAAAGGGGACCCCATAACCAGGGAGGCGATGCAGCTGAAAGCTCTTGAAATTGCCC
AAGAAATGAACATTCCAGAGAAAGGGTTCAAAGCAAGCTTGGGTTGGTGTCGAAGAATGATGAGAAGGTATGACCTGTCT
CTGAGGCACAAAGTACCTGTACCCCAGCACCTGCCTGAAGACCTGACTGAGAAGCTCATCACTTACCAGCGGACTGTGTT
ATCTCTGCGCAGGGCGCATGACTACGAGGTGACACAGATGGGGAATGCAGACGAGACACCCATCTGCTTGGAGGTGCCAT
CCAGGGTTACTGTTGACAACCAGGGTGAAAAGCCTGTGTTGGTCAAGACTCCAGGCAGGGAGAAACTAAGGATCACGGCC
ATGCTTGGTGTCTTGGCTGATGGGAAGAAGTTACCTCCGTATATCATTTTGAGGGGAACCTACATCCCCCCAGGAAAGTT
CCCCAGTGGGATGGAAATCCGCTGCCATCGCTATGGGTGGATGACTGAAGACTTGATGCAGGACTGGTTGGAAGTGGTGT
GGAGACGCAGGACAGGAGCACTTCCCAAGCAACGAGGGATGCTGATCCTGAATGGCTTCCGGGGTCATGCCACTGATTCT
GTGAAGAGTTCCATGGAGAGTCTGAACACAGACATGGTGATCATCCCCGGGAGCCTAACCCCACAGCTGCAGGTGCTGGA
TGTGGTGGTGTACAAGCCACTGAATGACAGTGTGCGTGCCCAGTACTCTAACTGGCTTCTGGCTGGGAACCTGGCGCTCA
GCCCTACTGGGAATGCCAAGAAGCCACCCCTGGGTCTCTTCCTGGAATGGGTCATGGTGGCGTGGAACAGCATCTCAAGT
GAATCCATTGTGCAAGGGTTCAAGAAGTGCCACATCTCCAGCAACTTGGAGGAAGAAGATGATGAACTGTGGGAAATCGA
AAGTGAGTTGCCAGGAGGAGGAGAACCACCGAAAGAATGTGATACTGAGAGCATGACTGAGGGCAACTGA
ATGGAGTCTACAACCTACCCTCTCAATTTGACCCTGAAAGAAGAAGAGGAAGAAGAAGAGATTCAGTGCCGGGAACTGAA
GGATGGCCCAACCGATATGCAAAAAGTACGAATCTGCTCAGAAGGTGGATGGGTTCCAGCCCTATTTGATGAGGTGGCCA
TATATTTTTCTGATGAGGAGTGGGAAGTTTTGACGGACCAACAAAAGGCCCTCTACCGGGAAGTCATGAGGATGAATTAT
GAAACTGTTCTATCCCTGGAATTCCCATTCCCTAAGCCAGACATGATCACTCGTTTGGAACGGGAGGAAGAGTCTCATAA
TTCTGAGGAGTGGCAGCTACAAGGAGGACCCGTTACAGAAAATGAAGAATCTGATGTGAAGTCTCCAGATTGGGCAACCC
CCATGAATACCACCTCCCACTTCCCTCAGCCTCAGCATCTTGACAGCTTTGGCCTGCGCCTGCCTCGGGACATCACTGAG
CTGCCTGAATGGAGTGAGGGGTACCCCTTCTGCATGGCCATGGGCTTCCCGGGGTACGACCTCTCGGCTGATGACATAGC
TGGGAAGTTTCAGTTCAGCCGGGGCATGCGCCGCAGTTACGACGCAGGATTCAAGTTGATGGTGGTAGAGTATGCCGAGA
GCACCAACAACTGCCAGGCTGCCAAGCAGTTTGGAGTATTCGAAAAAAACGTTCGAGACTGGCGCAAGGTGAAGCCACAG
CTGCAGAATGCCCATGCCATGCGACGGGCATTCCGAGGCCCCAAGAATGGCAGGTTTGCTCTGGTGGACCAACGCGTGGC
TGAGTATGTCAGATACATGCAGGCCAAAGGGGACCCCATAACCAGGGAGGCGATGCAGCTGAAAGCTCTTGAAATTGCCC
AAGAAATGAACATTCCAGAGAAAGGGTTCAAAGCAAGCTTGGGTTGGTGTCGAAGAATGATGAGAAGGTATGACCTGTCT
CTGAGGCACAAAGTACCTGTACCCCAGCACCTGCCTGAAGACCTGACTGAGAAGCTCATCACTTACCAGCGGACTGTGTT
ATCTCTGCGCAGGGCGCATGACTACGAGGTGACACAGATGGGGAATGCAGACGAGACACCCATCTGCTTGGAGGTGCCAT
CCAGGGTTACTGTTGACAACCAGGGTGAAAAGCCTGTGTTGGTCAAGACTCCAGGCAGGGAGAAACTAAGGATCACGGCC
ATGCTTGGTGTCTTGGCTGATGGGAAGAAGTTACCTCCGTATATCATTTTGAGGGGAACCTACATCCCCCCAGGAAAGTT
CCCCAGTGGGATGGAAATCCGCTGCCATCGCTATGGGTGGATGACTGAAGACTTGATGCAGGACTGGTTGGAAGTGGTGT
GGAGACGCAGGACAGGAGCACTTCCCAAGCAACGAGGGATGCTGATCCTGAATGGCTTCCGGGGTCATGCCACTGATTCT
GTGAAGAGTTCCATGGAGAGTCTGAACACAGACATGGTGATCATCCCCGGGAGCCTAACCCCACAGCTGCAGGTGCTGGA
TGTGGTGGTGTACAAGCCACTGAATGACAGTGTGCGTGCCCAGTACTCTAACTGGCTTCTGGCTGGGAACCTGGCGCTCA
GCCCTACTGGGAATGCCAAGAAGCCACCCCTGGGTCTCTTCCTGGAATGGGTCATGGTGGCGTGGAACAGCATCTCAAGT
GAATCCATTGTGCAAGGGTTCAAGAAGTGCCACATCTCCAGCAACTTGGAGGAAGAAGATGATGAACTGTGGGAAATCGA
AAGTGAGTTGCCAGGAGGAGGAGAACCACCGAAAGAATGTGATACTGAGAGCATGACTGAGGGCAACTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000033914 | ortholog_one2one | 1 retrogene | |
| Erinaceus europaeus | ENSEEUG00000014393 | ortholog_one2many | 1 retrogene | |
| Latimeria chalumnae | ENSLACG00000014539 | possible_ortholog | 1 retrogene | |
| Mus musculus | ENSMUSG00000040596 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000007615 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000011078 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dord_612 | 94.37 | 92.78 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDORG00000006822 retrocopies