Parental gene:

KLHL13, ENSECAG00000008237

Aliases:None
Description:kelch-like family member 13 [Source:HGNC Symbol;Acc:22931]
Organism:Horse (Equus caballus)
Coordinates:X:93657554..93714376(-)


>ENSECAG00000008237
ATGCCATTGAAATGGAAAACGAGCTCTCCTGCTATCTGGAAATTCCCAGTTCCTGTGCTTAAAACATCCAGGTCAACTCC
ACTTTCTCCAGCATACATATCTCTAGTGGAAGAGGAAGACCAACACATGAAATTGTCCCTTGGAAGCAGCGAAATGGGCC
TCTCATCCCATTTGCAGTCTTCCAAGGCAGGAGCTACACGCATCTTTACCAGCAATACCCACAGTTCTGTGGTGTTACAG
GGCTTTGACCAGCTTCGACTTGAAGGATTGCTTTGTGATGTGACCCTGATGCCGGGTGACACAGACGATGCCTTCCCTGT
GCACAGAGTCATGATGGCCTCTGCTAGTGATTACTTCAAGGCTATGTTCACAGGTGGAATGAAAGAACAAGATTTAATGT
GCATTAAGCTTCATGGTGTGAGCAAAGTCGGTTTAAGGAAAATTATTGATTTCATTTATACTGCAAAGCTTTCTCTTAAT
ATGGACAACCTTCAAGACACACTGGAAGCTGCCAGTTTTCTACAGATTCTACCGGTTTTGGACTTCTGCAAAGTGTTTCT
CATATCTGGGGTCACTTTAGACAACTGTGTCGAAGTTGGGCGGATTGCCAACACCTACAATCTGACAGAAGTGGATAAAT
ATGTTAACAGTTTCGTCTTGAAGAATTTTCCTGCGTTGCTCAGCACCGGGGAGTTCTTGAAACTCCCTTTTGAACGTCTT
GCCTTCGTGCTTTCCAGTAATAGCCTTAAACATTGCACTGAACTTGAGCTCTTTAAGGCTACCTGTCGCTGGCTACGCCT
AGAAGAGCCTCGGATGGACTTTGCTGCCAAGTTAATGAAGAACATACGATTTCCACTGATGACACCGCAGGAGCTCATTA
ATTACGTGCAAACCGTGGATTTCATGAGAACTGACAATACTTGTGTGAATCTCCTTTTGGAAGCCAGCAATTACCAAATG
ATGCCATATATGCAGCCAGTTATGCAGTCAGACAGGACTGCCATTCGGTCTGACACCACTCACTTGGTTACACTAGGAGG
AGTGCTGAGGCAGCAGCTAGTTGTCAGCAAGGAATTGCGCATGTATGATGAAAAGGCCCACGAGTGGAAATCGTTAGCCC
CCATGGATGCCCCAAGGTACCAGCATGGCATTGCCGTCATTGGAAATTTCCTCTATGTCGTTGGTGGACAGAGTAATTAT
GACACAAAAGGAAAAACGGCAGTCGATACTGTCTTCAGATTTGATCCTCGATATAATAAATGGATGCAAGTTGCATCTTT
GAATGAAAAGCGCACCTTCTTCCACCTAAGTGCCCTCAAAGGATATCTGTATGCAGTCGGTGGGCGAAACGCAGCTGGTG
AACTGCCTACAGTAGAATGTTACAATCCAAGAACAAATGAGTGGACCTATGTTGCCAAAATGAGTGAGCCCCATTATGGC
CATGCTGGAACAGTGTATGGAGGAGTAATGTATATTTCAGGAGGAATTACTCATGACACTTTCCAAAAGGAGCTCATGTG
CTTTGACCCTGATACTGACAAATGGATCCAGAAGGCGCCGATGACCACCGTCAGAGGTCTGCATTGCATGTGTACAGTGG
GAGAAAGGCTCTATGTCATTGGTGGCAACCACTTCAGAGGAACGAGTGATTATGATGATGTCCTAAGCTGTGAATACTAC
TCACCTATCCTTGACCAGTGGACCCCAATTGCTGCCATGTTAAGAGGGCAGAGTGATGTTGGGGTCGCTGTCTTTGAAAA
TAAAATCTACGTGGTTGGTGGGTATTCCTGGAATAATCGTTGTATGGTAGAGATAGTGCAGAAATATGATCCAGATAAAG
ATGAATGGCATAAGGTTTTTGATCTCCCAGAGTCCCTTGGCGGCATCCGAGCTTGTACACTCACGGTTTTTCCACCTGAA
GAAACCACACCATCACCTTCTAGAGAGTCCCCTCTTTCTGCACCTTAA

Library Parental gene expression (RPM)
SRP021940_synovial_membrane 14 .52 RPM
SRP021940_embryo 30 .56 RPM
SRP021940_cerebellum 24 .30 RPM
SRP021940_testis 3 .20 RPM
SRP021940_placental_villous 6 .59 RPM
SRP021940_articular_cartilage 0 .83 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000001782 ortholog_one2one 1 retrogene
retro_amel_749,
Bos taurus ENSBTAG00000000501 ortholog_one2one 1 retrogene
retro_btau_44,
Canis familiaris ENSCAFG00000018272 ortholog_one2one 1 retrogene
retro_cfam_422,
Callithrix jacchus ENSCJAG00000002447 ortholog_one2one 1 retrogene
retro_cjac_3406,
Cavia porcellus ENSCPOG00000011268 ortholog_one2one 1 retrogene
retro_cpor_590,
Loxodonta africana ENSLAFG00000008122 ortholog_one2one 1 retrogene
retro_lafr_1018,
Myotis lucifugus ENSMLUG00000027393 ortholog_one2one 1 retrogene
retro_mluc_204,
Macaca mulatta ENSMMUG00000002293 ortholog_one2one 1 retrogene
retro_mmul_42,
Mustela putorius furo ENSMPUG00000001730 ortholog_one2one 1 retrogene
retro_mputfur_169,
Mus musculus ENSMUSG00000036782 ortholog_one2one 1 retrogene
retro_mmus_121,
Nomascus leucogenys ENSNLEG00000014736 ortholog_one2one 1 retrogene
retro_nleu_1031,
Oryctolagus cuniculus ENSOCUG00000001993 ortholog_one2one 1 retrogene
retro_ocun_254,
Pongo abelii ENSPPYG00000020658 ortholog_one2one 1 retrogene
retro_pabe_60,
Rattus norvegicus ENSRNOG00000014029 ortholog_one2one 1 retrogene
retro_rnor_154,
Sus scrofa ENSSSCG00000012637 ortholog_one2one 1 retrogene
retro_sscr_51,
Ictidomys tridecemlineatus ENSSTOG00000012035 ortholog_one2one 1 retrogene
retro_itri_124,
Tarsius syrichta ENSTSYG00000002521 ortholog_one2one 1 retrogene
retro_tsyr_19,
Tursiops truncatus ENSTTRG00000014098 ortholog_one2one 1 retrogene
retro_ttru_26,
Vicugna pacos ENSVPAG00000003091 ortholog_one2one 1 retrogene
retro_vpac_8,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_622 91.41 96.03
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Download FASTA sequences of all ENSECAG00000008237 retrocopies