Parental gene:

Klhl13, ENSMUSG00000036782

Aliases:Klhl13, 1200009K10Rik, AI451128, Bklhd2, D130072F20Rik, mKIAA1309
Description:kelch-like 13 [Source:MGI Symbol;Acc:MGI:1914705]
Organism:Mouse (Mus musculus)
Coordinates:X:23219270..23365082(-)


>ENSMUSG00000036782
ATGGATATTCTTCACAGAGGAGAATTGGTTGCTGCAATACTCCGCAACCGATCACTTGTGGAAGAGGAAGACCAGCACTT
GAAACTGTGCCTTGGAAGTGAAATGGGCCTCTCTTCCCATTTGCAGTCTTGCAAGGCAGGAAGTACACGCATCTTTACCA
GCAACAGCCACAGTTCTGTGGTGTTACAGGGCTTTGACCAGCTTCGGCTTGATGGATTGCTTTGTGATGTGACACTGATG
CCAGGTGATACAGATGATGCTTACCCTGTGCACAGAGTCATGATGGCATCTGCTAGTGACTACTTCAAAGCTATGTTCAC
AGGTGGAATGAAAGAACAAGAGCTGATGTGCATTAAGCTTCATGGCGTGAGCAGAGTGGGTCTACGGAAAATTATTGATT
TCATCTATACTGCAAAGCTTTCTCTTAACATGGACACCCTTCAGGATACGCTGGAAGCCGCCAGCTTTCTTCAGATTCTT
CCGGTTTTAGACTTCTGCAAAGTGTTTCTCATATCTGGGGTCACTTTGGATAACTGTGTTGAAGTTGGACGGATTGCCAA
CACCTACCATCTGACAGAAGTGGATAAATATGTCAACAGCTTCGTCTTAAAGAATTTTGCTGCATTGCTGAGCACTGGGG
AGTTCCTGAAGCTTCCCTTCGAGCGCCTTGCCTTTGTCCTGTCCAGCAACAGCCTTAAGCGCTGCACCGAACTTGACCTC
TTCAAAGCTACCTGTCGCTGGCTTCGCCTGGAAGAACCTAGAATGGACGTTGCTGCAAAACTAATGAAGAATATACGATT
TCCGCTGATGACACCACAGGAGCTCATTAATTATGTGCAAACCGTGGATTTCATGAGAACTGACAATACTTGCGTCAATT
TGCTTCTGGAAGCCAGCAATTACCAAATGATGCCGTTTATGCAGCCAGTTATGCAGTCAGACAGGACTGCCATTCGGTCT
GACACCACTCGTTTGGTTACACTCGGAGGAGTCCTGAGACAGCAGCTTGTCGTCAGTAAAGAATTGCGCATGTATGATGA
AAAGACCCACGAGTGGAAATCTCTAGCCCCCATGGATGCCCCAAGATACCAGCATGGCATTGCTGTCATCGGAAATTTTC
TCTACGTTGTTGGTGGGCAGAGTAATTATGACACAAAAGGAAAAACCGCCGTCGATACAGTGTTTAGATTTGATCCTCGA
TACAACAAATGGATCCAAGTTGCATCTTTAAATGAAAAGCGCACCTTCTTCCACCTAAGTGCCCTCAAAGGATTTCTGTA
TGCAGTTGGTGGACGAAATGCAGCTGGAGAACTCCCTACTGTGGAATGTTACAATCCGAGAACAAATGAATGGACCTATG
TTGCCAAAATGAATGAACCTCACTATGGCCATGCTGGAACTGTGTATGGAGGAGTGATGTATATTTCAGGAGGAATTACC
CATGACACTTTCCAAAAGGAGCTCATGTGCTTCGACCCTGATACTGACAAATGGACCCAGAAGGCACCGATGACCACTGT
CCGAGGCCTACACTGCATGTGTACGGTGGGAGATAGGCTCTACGTCATTGGTGGCAACCATTTCCGAGGAACCAGTGATT
ATGATGATGTCCTGAGCTGTGAATACTACTCACCTATCCTTGACCAGTGGACCCCAATTGCTTCCATGTTAAGAGGGCAG
AGTGATGTTGGGGTCGCTGTCTTTGAGAATAAAATCTATGTGGTTGGTGGCTATTCATGGAATAATCGCTGTATGGTAGA
GATAGTGCAGAAGTATGATCCAGAGAAAAATGAATGGCATAAGGTTTTCGATCTGCCAGAGTCTCTTGGTGGTATTCGAG
CTTGTACACTTACAGTTTATCCACCTGAAGAAGCCACACCATCACCTTCTAGAGAGTCCCCTCTTTCTGGACCCTAA

Library Parental gene expression (RPM)
SRP007412_brain 46 .82 RPM
SRP007412_cerebellum 25 .27 RPM
SRP007412_heart 20 .23 RPM
SRP007412_kidney 11 .99 RPM
SRP007412_liver 7 .73 RPM
SRP007412_testis 0 .82 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000001782 ortholog_one2one 1 retrogene
retro_amel_749,
Bos taurus ENSBTAG00000000501 ortholog_one2one 1 retrogene
retro_btau_44,
Canis familiaris ENSCAFG00000018272 ortholog_one2one 1 retrogene
retro_cfam_422,
Callithrix jacchus ENSCJAG00000002447 ortholog_one2one 1 retrogene
retro_cjac_3406,
Cavia porcellus ENSCPOG00000011268 ortholog_one2one 1 retrogene
retro_cpor_590,
Equus caballus ENSECAG00000008237 ortholog_one2one 1 retrogene
retro_ecab_622,
Loxodonta africana ENSLAFG00000008122 ortholog_one2one 1 retrogene
retro_lafr_1018,
Myotis lucifugus ENSMLUG00000027393 ortholog_one2one 1 retrogene
retro_mluc_204,
Macaca mulatta ENSMMUG00000002293 ortholog_one2one 1 retrogene
retro_mmul_42,
Mustela putorius furo ENSMPUG00000001730 ortholog_one2one 1 retrogene
retro_mputfur_169,
Nomascus leucogenys ENSNLEG00000014736 ortholog_one2one 1 retrogene
retro_nleu_1031,
Oryctolagus cuniculus ENSOCUG00000001993 ortholog_one2one 1 retrogene
retro_ocun_254,
Pongo abelii ENSPPYG00000020658 ortholog_one2one 1 retrogene
retro_pabe_60,
Pteropus vampyrus ENSPVAG00000015989 ortholog_one2one 1 retrogene
retro_pvam_1485,
Rattus norvegicus ENSRNOG00000014029 ortholog_one2one 1 retrogene
retro_rnor_154,
Sus scrofa ENSSSCG00000012637 ortholog_one2many 1 retrogene
retro_sscr_51,
Ictidomys tridecemlineatus ENSSTOG00000012035 ortholog_one2one 1 retrogene
retro_itri_124,
Tarsius syrichta ENSTSYG00000002521 ortholog_one2one 1 retrogene
retro_tsyr_19,
Tursiops truncatus ENSTTRG00000014098 ortholog_one2one 1 retrogene
retro_ttru_26,
Vicugna pacos ENSVPAG00000003091 ortholog_one2one 1 retrogene
retro_vpac_8,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_121 89.23 94.44
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Download FASTA sequences of all ENSMUSG00000036782 retrocopies