Parental gene:

ARF1, ENSECAG00000009563

Aliases:None
Description:ADP-ribosylation factor 1 [Source:HGNC Symbol;Acc:652]
Organism:Horse (Equus caballus)
Coordinates:11:17883440..17898988(-)


>ENSECAG00000009563
ATGGGGAACGTTTTTGAAAAACTGTTTAAAAGTCTATTTGGGAAAAAAGAGATGCGGATTCTTATGGTGGGTTTGGATGC
AGCTGGAAAAACCACCATCTTGTATAAACTGAAGCTGGGAGAGATTGTGACTACCATCCCTACAATAGGTTTCAATGTGG
AGACAGTAGAGTATAAAAACATCAGCTTCACAGTCTGGGATGTCGGTGGCCAGGACAAAATCAGACCTTTGTGGCGACAT
TATTTCCAGAACACCCAAGGTCTGATTTTTGTGGTTGACAGTAATGACAGAGAGCGGGTCAATGAGGCCCGAGAAGAGCT
AACCAGAATGTTAGCAGAAGATGAGCTCAGAGATGCAGTTTTATTGGTGTTTGTAAATAAACAGGATCTTCCCAATGCTA
TGAATGCGGCAGAGATAACAGACAAGCTGGGCTTGCATTCCCTCCGCCAGAGAAACTGGTACATTCAGGCTACTTGTGCC
ACCAGTGGAGATGGGCTTTACGAAGGCCTGGACTGGCTCTCCAACCAGCTCAAAAACCAGAAGTGA

Library Parental gene expression (RPM)
SRP021940_synovial_membrane 12 .93 RPM
SRP021940_embryo 12 .45 RPM
SRP021940_cerebellum 19 .21 RPM
SRP021940_testis 7 .16 RPM
SRP021940_placental_villous 12 .27 RPM
SRP021940_articular_cartilage 5 .90 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000004184 ortholog_one2one 1 retrogene
retro_amel_1639,
Bos taurus ENSBTAG00000006785 ortholog_one2one 1 retrogene
retro_btau_26,
Ciona savignyi ENSCSAVG00000007011 possible_ortholog 1 retrogene
retro_csav_2,
Latimeria chalumnae ENSLACG00000019009 possible_ortholog 1 retrogene
retro_lcha_10,
Mus musculus ENSMUSG00000062421 ortholog_one2one 1 retrogene
retro_mmus_2056,
Oryctolagus cuniculus ENSOCUG00000023198 ortholog_one2one 1 retrogene
retro_ocun_132,
Otolemur garnettii ENSOGAG00000002503 ortholog_one2many 1 retrogene
retro_ogar_263,
Ictidomys tridecemlineatus ENSSTOG00000019768 ortholog_one2one 1 retrogene
retro_itri_883,
Tetraodon nigroviridis ENSTNIG00000011685 possible_ortholog 1 retrogene
retro_tnig_19,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_106 69.36 95.58
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Download FASTA sequences of all ENSECAG00000009563 retrocopies