Parental gene: | GPS2, ENSECAG00000010635 |
| Aliases: | None |
| Description: | G protein pathway suppressor 2 [Source:HGNC Symbol;Acc:4550] |
| Organism: | Horse (Equus caballus) |
| Coordinates: | 11:50323171..50325464(-) |
>ENSECAG00000010635
ATGCCTGCGCTCTTGGAGCGCCCCAAGCTTTCCAACGCCATGGCCAGGGCGTTGCACCGGCACATCATGATGGAGCGGGA
GCGCAAGCGACAGGAGGAAGAAGAGGTGGACAAGATGATGGAACAGAAAATGAAGGAAGAGCAGGAGAGAAGGAAGAAAA
AGGAGATGGAAGAGAGAATGTCGCTAGAGGAGACCAAGGAACAAATCCTGAAGTTGCAGGAGAAGCTTTTGGCCCTACAG
GAAGAGAAGCACCAGCTTTTCCTGCAGCTCAAGAAAGTTTTACATGAGGAAGAAAAACGAAGGCGAAAGGAGCAGAGTGA
CCTGACCACTCTGACATCAGCTGCATACCAGCAGGGCCTGACTGTTCACACAGGAACTCACCTCCTCAGCATGCAGGGGA
GCCCTGGAGGACACAATCGCCCAGGCACCCTCATGGCAGCTGACAGAGCCAAACAGATGTTTGGACCCCAAGTGCTTACG
ACCCGGCACTACGTGGGCTCAGCAGCTGCTTTTGCAGGGACCCCAGAGCACGGGCAATTCCAAGGCAGCCCAGGTGGTGC
CTATGGGACTGCTCAGCCCCCACCTCACTATGGACCCACACAGCCCGCCTACAGTCCTAGTCAGCAGCTCAGGGCACCTT
CAGCGTTTCCTGCAGTGCAGTACCTGTCTCAGCCACAGCCACAGCCCTATGCCGTGCACAGCCACTTTCAGCCCACCCAG
ACAGGGTTCCTCCAGCCTGGTGGTGCCTTGTCCTTGCAAAAGCAGATGGAACATGCTAACCAGCAGACTGGCTTCTCTGA
CTCATCCTCCCTGCGTCCCATGCACCCCCAAGCTCTGCATCCAGCTCCAGGACTCCTTGCCTCCCCCCAGCTCCCTGTGC
AGATGCAACCAGCA
ATGCCTGCGCTCTTGGAGCGCCCCAAGCTTTCCAACGCCATGGCCAGGGCGTTGCACCGGCACATCATGATGGAGCGGGA
GCGCAAGCGACAGGAGGAAGAAGAGGTGGACAAGATGATGGAACAGAAAATGAAGGAAGAGCAGGAGAGAAGGAAGAAAA
AGGAGATGGAAGAGAGAATGTCGCTAGAGGAGACCAAGGAACAAATCCTGAAGTTGCAGGAGAAGCTTTTGGCCCTACAG
GAAGAGAAGCACCAGCTTTTCCTGCAGCTCAAGAAAGTTTTACATGAGGAAGAAAAACGAAGGCGAAAGGAGCAGAGTGA
CCTGACCACTCTGACATCAGCTGCATACCAGCAGGGCCTGACTGTTCACACAGGAACTCACCTCCTCAGCATGCAGGGGA
GCCCTGGAGGACACAATCGCCCAGGCACCCTCATGGCAGCTGACAGAGCCAAACAGATGTTTGGACCCCAAGTGCTTACG
ACCCGGCACTACGTGGGCTCAGCAGCTGCTTTTGCAGGGACCCCAGAGCACGGGCAATTCCAAGGCAGCCCAGGTGGTGC
CTATGGGACTGCTCAGCCCCCACCTCACTATGGACCCACACAGCCCGCCTACAGTCCTAGTCAGCAGCTCAGGGCACCTT
CAGCGTTTCCTGCAGTGCAGTACCTGTCTCAGCCACAGCCACAGCCCTATGCCGTGCACAGCCACTTTCAGCCCACCCAG
ACAGGGTTCCTCCAGCCTGGTGGTGCCTTGTCCTTGCAAAAGCAGATGGAACATGCTAACCAGCAGACTGGCTTCTCTGA
CTCATCCTCCCTGCGTCCCATGCACCCCCAAGCTCTGCATCCAGCTCCAGGACTCCTTGCCTCCCCCCAGCTCCCTGTGC
AGATGCAACCAGCA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP021940_synovial_membrane | 12 .77 RPM |
| SRP021940_embryo | 14 .40 RPM |
| SRP021940_cerebellum | 12 .36 RPM |
| SRP021940_testis | 53 .20 RPM |
| SRP021940_placental_villous | 9 .81 RPM |
| SRP021940_articular_cartilage | 12 .57 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000016576 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000132522 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000001672 | ortholog_one2many | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000010645 | ortholog_one2one | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000026169 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000023170 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000009364 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000023046 | ortholog_one2one | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000005052 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000017940 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ecab_124 | 69.86 | 94.30 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ecab_480 | 61.58 | 55.70 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSECAG00000010635 retrocopies