Parental gene: | FBXL3, ENSECAG00000011128 |
| Aliases: | None |
| Description: | F-box and leucine-rich repeat protein 3 [Source:HGNC Symbol;Acc:13599] |
| Organism: | Horse (Equus caballus) |
| Coordinates: | 17:49845633..49858841(-) |
>ENSECAG00000011128
ATGAAACGAGGAGGAAGAGATCATGACGATAATTCATCAGAAGAAGGTACTACAGAGAAATCCAAGAAACTGAGGACTAC
AAATGAGCATTCTCCAACTTGTGATTGGGGTAACCTCCTTCAGGACATTGTTCTTCAAGTATTTAAGTATTTGCCTCTTC
TTGACCGGGCTCATGCTTCACAAGTTTGCCGCAGCTGGAACCAGGTATTTCACATGCCTGACTTGTGGAGATGTTTTGAA
TTTGAACTGAATCAGCCAGCTACGTCTTATTTGAAAGCTACACATCCAGAGCTGATCAAACAGATTATTAAAAGACATTC
AAATCATCTACAGTATGTCAGCTTCAAGGTGGACAGCAGCAAAGAGTCAGCTGAAGCAGCTTGTGATATATTATCACAAC
TTGTGAATTGCTCTTTAAAAACACTTGGACTTATTTCAACTGCTCGGCCAAGCTTTATGGATTTACCAAAGTCTCACTTT
ATCTCTGCACTGACGGTTGTGTTTGTAAACTCCAAATCCTTGTCCTCACTTAAGATAGATGATACCCCAGTAGATGATCC
ATCCCTCAAAGTACTAGTGGCCAACAACAGTGATACGCTCAAGCTGCTAAAAATGAGCAGTTGTCCTCACGTCTCTCCAG
CAGGTATCCTTTGTGTGGCTGATCAATGTCATGGCTTACGTGAATTGGCCTTGAATTACCACTTGTTAAGTGATGAATTG
CTGCTTGCTTTATCTTCTGAAAAACACGTTCGATTAGAACATTTGCGTATTGATGTAGTCAGTGAGAATCCTGGACAGAC
ACACTTTCATACTATTCAGAAGAGCAGCTGGGATGCTTTCATCAGACATTCACCCAAAGTGAACTTAGTGATGTATTTTT
TTTTATATGAAGAGGAATTTGATCCATTTTTTCGGTATGAAATACCTGCTACCCATCTTTACTTTGGGAGATCAGTAAGC
AAAGATGTGCTTGGCCGAGTGGGAATGACATGCCCTAGACTAGTTGAACTAGTAGTGTGTGCAAATGGATTACGGCCACT
TGATGAAGAGCTAATTCGCATTGCAGAACGTTGCAAAAATCTGTCAGCTATTGGACTGGGGGAATGCGAAGTCTCATGTA
GTGCCTTTGTTGAGTTTGTGAAGATGTGTGGTGGCCGCCTGTCTCAATTATCCATTATGGAAGAAGTATTAATTCCTGAC
CAAAAGTATAGTCTGGAGCAGATTCATTGGGAAGTGTCCAAGCATCTTGGTAGGGTGTGGTTTCCAGACATGATGCCCAC
TTGGTAA
ATGAAACGAGGAGGAAGAGATCATGACGATAATTCATCAGAAGAAGGTACTACAGAGAAATCCAAGAAACTGAGGACTAC
AAATGAGCATTCTCCAACTTGTGATTGGGGTAACCTCCTTCAGGACATTGTTCTTCAAGTATTTAAGTATTTGCCTCTTC
TTGACCGGGCTCATGCTTCACAAGTTTGCCGCAGCTGGAACCAGGTATTTCACATGCCTGACTTGTGGAGATGTTTTGAA
TTTGAACTGAATCAGCCAGCTACGTCTTATTTGAAAGCTACACATCCAGAGCTGATCAAACAGATTATTAAAAGACATTC
AAATCATCTACAGTATGTCAGCTTCAAGGTGGACAGCAGCAAAGAGTCAGCTGAAGCAGCTTGTGATATATTATCACAAC
TTGTGAATTGCTCTTTAAAAACACTTGGACTTATTTCAACTGCTCGGCCAAGCTTTATGGATTTACCAAAGTCTCACTTT
ATCTCTGCACTGACGGTTGTGTTTGTAAACTCCAAATCCTTGTCCTCACTTAAGATAGATGATACCCCAGTAGATGATCC
ATCCCTCAAAGTACTAGTGGCCAACAACAGTGATACGCTCAAGCTGCTAAAAATGAGCAGTTGTCCTCACGTCTCTCCAG
CAGGTATCCTTTGTGTGGCTGATCAATGTCATGGCTTACGTGAATTGGCCTTGAATTACCACTTGTTAAGTGATGAATTG
CTGCTTGCTTTATCTTCTGAAAAACACGTTCGATTAGAACATTTGCGTATTGATGTAGTCAGTGAGAATCCTGGACAGAC
ACACTTTCATACTATTCAGAAGAGCAGCTGGGATGCTTTCATCAGACATTCACCCAAAGTGAACTTAGTGATGTATTTTT
TTTTATATGAAGAGGAATTTGATCCATTTTTTCGGTATGAAATACCTGCTACCCATCTTTACTTTGGGAGATCAGTAAGC
AAAGATGTGCTTGGCCGAGTGGGAATGACATGCCCTAGACTAGTTGAACTAGTAGTGTGTGCAAATGGATTACGGCCACT
TGATGAAGAGCTAATTCGCATTGCAGAACGTTGCAAAAATCTGTCAGCTATTGGACTGGGGGAATGCGAAGTCTCATGTA
GTGCCTTTGTTGAGTTTGTGAAGATGTGTGGTGGCCGCCTGTCTCAATTATCCATTATGGAAGAAGTATTAATTCCTGAC
CAAAAGTATAGTCTGGAGCAGATTCATTGGGAAGTGTCCAAGCATCTTGGTAGGGTGTGGTTTCCAGACATGATGCCCAC
TTGGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP021940_synovial_membrane | 14 .71 RPM |
| SRP021940_embryo | 13 .48 RPM |
| SRP021940_cerebellum | 21 .45 RPM |
| SRP021940_testis | 24 .87 RPM |
| SRP021940_placental_villous | 16 .45 RPM |
| SRP021940_articular_cartilage | 29 .22 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Otolemur garnettii | ENSOGAG00000000250 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ecab_1048 | 70.48 | 87.38 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ecab_1049 | 70.74 | 87.38 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ecab_1124 | 70.74 | 87.38 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSECAG00000011128 retrocopies