Parental gene: | CAB39, ENSECAG00000015288 |
| Aliases: | None |
| Description: | calcium binding protein 39 [Source:HGNC Symbol;Acc:20292] |
| Organism: | Horse (Equus caballus) |
| Coordinates: | 6:18205872..18248576(+) |
>ENSECAG00000015288
ATGCCGTTCCCGTTCGGGAAGTCTCACAAATCTCCAGCAGACATTGTGAAGAACCTGAAGGAGAGCATGGCCCTTCTGGA
AAAGCAAGACATTTCTGACAAGAAAGTAGAAAAGGCTACAGAAGAAGTTTCCAAAAATCTGGTTGCCATGAAGGAAATTC
TGTATGGCACAAATGAAAAAGAACCACAGACAGAAGCAGTGGCACAACTCGCTCAAGAACTCTATAACAGTGGGCTCCTT
AGCACCCTGGTAGCTGACTTACAGCTCATTGACTTTGAGGGCAAAAAAGACGTGGCTCAAATTTTCAACAATATTCTCAG
AAGACAAATTGGTACAAGAACTCCTACTGTTGAATACATCTGCACCCAACAGAATATTTTGTTCATGTTATTGAAAGGAT
ATGAATCTCCAGAAATAGCTCTAAATTGTGGAATAATGTTAAGAGAATGCATCAGACATGAACCACTTGCAAAAATCATT
TTGTGGTCAGAACAGTTTTATGATTTCTTCAGATATGTGGAAATGTCAACATTTGACATAGCTTCAGATGCATTTGCCAC
ATTCAAGGATTTACTTACAAGACATAAATTGCTCAGTGCAGAATTTTTGGAACAGCATTATGATAGATTCTTCAGTGAAT
ATGAGAAGTTGCTTCATTCGGAAAATTATGTGACAAAAAGGCAGTCACTCAAGCTTCTCGGTGAACTACTATTAGACAGA
CACAACTTCACAATTATGACAAAATACATCAGTAAACCTGAGAACCTCAAATTAATGATGAACCTTCTGCGAGACAAAAG
TCGTAACATCCAGTTTGAGGCCTTTCATGTTTTTAAGGTGTTTGTGGCCAATCCCAACAAGACGCAGCCCATCCTCGACA
TCCTCCTCAAGAACCAGACCAAACTCATAGAGTTCCTCAGCAAGTTTCAGAATGACAGGACCGAGGACGAACAGTTTAAC
GATGAGAAGACCTATTTAGTTAAACAGATCAGGGATTTGAAGAGACCAGCTCAGCAAGAAGCCTAA
ATGCCGTTCCCGTTCGGGAAGTCTCACAAATCTCCAGCAGACATTGTGAAGAACCTGAAGGAGAGCATGGCCCTTCTGGA
AAAGCAAGACATTTCTGACAAGAAAGTAGAAAAGGCTACAGAAGAAGTTTCCAAAAATCTGGTTGCCATGAAGGAAATTC
TGTATGGCACAAATGAAAAAGAACCACAGACAGAAGCAGTGGCACAACTCGCTCAAGAACTCTATAACAGTGGGCTCCTT
AGCACCCTGGTAGCTGACTTACAGCTCATTGACTTTGAGGGCAAAAAAGACGTGGCTCAAATTTTCAACAATATTCTCAG
AAGACAAATTGGTACAAGAACTCCTACTGTTGAATACATCTGCACCCAACAGAATATTTTGTTCATGTTATTGAAAGGAT
ATGAATCTCCAGAAATAGCTCTAAATTGTGGAATAATGTTAAGAGAATGCATCAGACATGAACCACTTGCAAAAATCATT
TTGTGGTCAGAACAGTTTTATGATTTCTTCAGATATGTGGAAATGTCAACATTTGACATAGCTTCAGATGCATTTGCCAC
ATTCAAGGATTTACTTACAAGACATAAATTGCTCAGTGCAGAATTTTTGGAACAGCATTATGATAGATTCTTCAGTGAAT
ATGAGAAGTTGCTTCATTCGGAAAATTATGTGACAAAAAGGCAGTCACTCAAGCTTCTCGGTGAACTACTATTAGACAGA
CACAACTTCACAATTATGACAAAATACATCAGTAAACCTGAGAACCTCAAATTAATGATGAACCTTCTGCGAGACAAAAG
TCGTAACATCCAGTTTGAGGCCTTTCATGTTTTTAAGGTGTTTGTGGCCAATCCCAACAAGACGCAGCCCATCCTCGACA
TCCTCCTCAAGAACCAGACCAAACTCATAGAGTTCCTCAGCAAGTTTCAGAATGACAGGACCGAGGACGAACAGTTTAAC
GATGAGAAGACCTATTTAGTTAAACAGATCAGGGATTTGAAGAGACCAGCTCAGCAAGAAGCCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP021940_synovial_membrane | 11 .31 RPM |
| SRP021940_embryo | 14 .19 RPM |
| SRP021940_cerebellum | 18 .44 RPM |
| SRP021940_testis | 27 .24 RPM |
| SRP021940_placental_villous | 25 .93 RPM |
| SRP021940_articular_cartilage | 13 .40 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000013349 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000002000 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ecab_288 | 92.19 | 74.19 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSECAG00000015288 retrocopies