Parental gene:

ENSECAG00000016162

Aliases:None
Description:None
Organism:Horse (Equus caballus)
Coordinates:1:37375837..37433761(-)


>ENSECAG00000016162
ATGGCTACCCAAAGGAAACACTTGGTAAAAGATTTCAATCCTTACATCACCTGCTATATCTGTAAAGGGTATCTGATCAA
GCCAACTACAGTGACCGAATGCCTCCATACCTTCTGTAAGACTTGTATTGTCCAGCACTTTGAAGATAGCAATGATTGTC
CAAGGTGTGGCAACCAGTTAATGACAACTCCATTCTTCCAGTTGCTCAGGTTGGACAATACGTTAGAGGAAATCATATTT
AAACTGGTCCCTGGACTACGAGAACAAGAACTTGAGCGTGAATCTGAATTTTGGAAGAAAAATAAGCCTCAAGAAAATGG
ACAAGATGATACTTCAAAAGTTGACAGACCTAAAGTTGATGAAGAAGGTGATGAAAATCAAGATGATAAAGACTATCACA
GAAGTGACCCACAAATTGCTATATGTCTAGATTGTTTACGAAATAATGGACAATCAGGGGACAATGTAGTAAAGGGTTTA
ATGAAGAAATTCATTCGGTGTTCTACACGTGTAACTGTGGGAACTATTAAAAAATTTCTAAGTTTAAAACTAAAACTTCC
AAGTTCTTATGAGTTGGATGTGCTGTGCAATGGTGAAATTATGGGGAAGGATCATACTATGGAATTCATCTACATGACGA
GGTGGCGACTAAGAGGCGAAAACTTTCGGTGTCTGAACTGCTCAGCTTCGCAAGTCTGCTCTCAGGATGGCCCTTTATAT
CAGTCATACCCCATGGTATTGCAGTATCGACCGAGAATTGATTTTGGTTAG

Library Parental gene expression (RPM)
SRP021940_articular_cartilage 4 .60 RPM
SRP021940_cerebellum 0 .57 RPM
SRP021940_embryo 1 .53 RPM
SRP021940_placental_villous 4 .14 RPM
SRP021940_synovial_membrane 1 .35 RPM
SRP021940_testis 10 .04 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000011001 possible_ortholog 1 retrogene
retro_cjac_2702,
Microcebus murinus ENSMICG00000012035 possible_ortholog 5 retrogenes
retro_mmur_1358, retro_mmur_1499, retro_mmur_253, retro_mmur_858, retro_mmur_982,
Procavia capensis ENSPCAG00000007871 possible_ortholog 1 retrogene
retro_pcap_302,
Ictidomys tridecemlineatus ENSSTOG00000009179 ortholog_one2one 1 retrogene
retro_itri_1546,
Tursiops truncatus ENSTTRG00000014814 ortholog_one2one 1 retrogene
retro_ttru_1529,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_213 96.48 100.00
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Download FASTA sequences of all ENSECAG00000016162 retrocopies