Parental gene: | ENSECAG00000016162 |
| Aliases: | None |
| Description: | None |
| Organism: | Horse (Equus caballus) |
| Coordinates: | 1:37375837..37433761(-) |
>ENSECAG00000016162
ATGGCTACCCAAAGGAAACACTTGGTAAAAGATTTCAATCCTTACATCACCTGCTATATCTGTAAAGGGTATCTGATCAA
GCCAACTACAGTGACCGAATGCCTCCATACCTTCTGTAAGACTTGTATTGTCCAGCACTTTGAAGATAGCAATGATTGTC
CAAGGTGTGGCAACCAGTTAATGACAACTCCATTCTTCCAGTTGCTCAGGTTGGACAATACGTTAGAGGAAATCATATTT
AAACTGGTCCCTGGACTACGAGAACAAGAACTTGAGCGTGAATCTGAATTTTGGAAGAAAAATAAGCCTCAAGAAAATGG
ACAAGATGATACTTCAAAAGTTGACAGACCTAAAGTTGATGAAGAAGGTGATGAAAATCAAGATGATAAAGACTATCACA
GAAGTGACCCACAAATTGCTATATGTCTAGATTGTTTACGAAATAATGGACAATCAGGGGACAATGTAGTAAAGGGTTTA
ATGAAGAAATTCATTCGGTGTTCTACACGTGTAACTGTGGGAACTATTAAAAAATTTCTAAGTTTAAAACTAAAACTTCC
AAGTTCTTATGAGTTGGATGTGCTGTGCAATGGTGAAATTATGGGGAAGGATCATACTATGGAATTCATCTACATGACGA
GGTGGCGACTAAGAGGCGAAAACTTTCGGTGTCTGAACTGCTCAGCTTCGCAAGTCTGCTCTCAGGATGGCCCTTTATAT
CAGTCATACCCCATGGTATTGCAGTATCGACCGAGAATTGATTTTGGTTAG
ATGGCTACCCAAAGGAAACACTTGGTAAAAGATTTCAATCCTTACATCACCTGCTATATCTGTAAAGGGTATCTGATCAA
GCCAACTACAGTGACCGAATGCCTCCATACCTTCTGTAAGACTTGTATTGTCCAGCACTTTGAAGATAGCAATGATTGTC
CAAGGTGTGGCAACCAGTTAATGACAACTCCATTCTTCCAGTTGCTCAGGTTGGACAATACGTTAGAGGAAATCATATTT
AAACTGGTCCCTGGACTACGAGAACAAGAACTTGAGCGTGAATCTGAATTTTGGAAGAAAAATAAGCCTCAAGAAAATGG
ACAAGATGATACTTCAAAAGTTGACAGACCTAAAGTTGATGAAGAAGGTGATGAAAATCAAGATGATAAAGACTATCACA
GAAGTGACCCACAAATTGCTATATGTCTAGATTGTTTACGAAATAATGGACAATCAGGGGACAATGTAGTAAAGGGTTTA
ATGAAGAAATTCATTCGGTGTTCTACACGTGTAACTGTGGGAACTATTAAAAAATTTCTAAGTTTAAAACTAAAACTTCC
AAGTTCTTATGAGTTGGATGTGCTGTGCAATGGTGAAATTATGGGGAAGGATCATACTATGGAATTCATCTACATGACGA
GGTGGCGACTAAGAGGCGAAAACTTTCGGTGTCTGAACTGCTCAGCTTCGCAAGTCTGCTCTCAGGATGGCCCTTTATAT
CAGTCATACCCCATGGTATTGCAGTATCGACCGAGAATTGATTTTGGTTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP021940_synovial_membrane | 1 .35 RPM |
| SRP021940_embryo | 1 .53 RPM |
| SRP021940_cerebellum | 0 .57 RPM |
| SRP021940_testis | 10 .04 RPM |
| SRP021940_placental_villous | 4 .14 RPM |
| SRP021940_articular_cartilage | 4 .60 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000011001 | possible_ortholog | 1 retrogene | |
| Microcebus murinus | ENSMICG00000012035 | possible_ortholog | 5 retrogenes | |
| Procavia capensis | ENSPCAG00000007871 | possible_ortholog | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000009179 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000014814 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ecab_213 | 96.48 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSECAG00000016162 retrocopies