Parental gene:

ENSECAG00000017754

Aliases:None
Description:None
Organism:Horse (Equus caballus)
Coordinates:5:46049851..46059648(+)


>ENSECAG00000017754
ATGAGTTTGGCTGGGGGCCGGGCCCCCCGGAAGACCGCGGGGAACCGGCTTTCTGGGCTCCTGGAGGCAGAGGAGGAAGA
TGAGTTCTACCAGACGACTTATGGGGACAGATCAGAAGAATCAGGAGATGATGAGTATCAAGGGGACCAGTCAGACACAG
AGGATGAGGTGGACTCTGACTTTGACATCGATGAAGGAGATGAACCATCCAGTGATGGAGAAGCAGAAGAGCCAAGAAGG
AAGCGCCGAGTAGTCACCAAAGCCTATAAGGAGCCTCTCAAGAGCTTAAGGCCTCGAAAGGTCAGCACCCCAGCTGGTAG
CTCTCAGAAGGCCAGAGAAGAGAAGGCACTGCTACCACTAGAACTACAAGATGATGGCTCTGACAGTCGGAAGTCCATGC
GTCAGTCTACAGCTGAGCATACAAGACAAACATTCCTTCGGGTACAGGAGAGGCAGGGCCAGTCACGGCGGCGAAAGGGC
CCCCACTGTGAGCGACCACTGACCCAGGAGGAGCTGCTCAGGGAGGCCAAGATCACAGAGGAGCTCAACTTACGTTCACT
GGAGACATATGAGCGGCTGGAGGCTGACAAAAAGAAGCAGGTTCACAAGAAGCGGAAGTGCCCTCCCATAATCACGTATC
ATTCAGTGACAGTGCCGCTTGTTGGGGAGCCAGGCCCTAAAGAAGAGAATGTCGATGTAGAAGGGCTTGATCCTGCTCCC
ACGGCTTCTGCATTGACTCCCCGTGCTGGGACTGGACCCATCATCCCTCCTGCTCGCTGCTCACGTACCTTCATCACTTT
TAGTGATGATGCGACATTTGAAGAATGGTTTCCCCAGGGGCGGCCCCCAAAGGTCCCTGTTAGAGAGGTCTGCCCGGTGA
CCCATCGGCCAGCCCTATACCGGGATCCTGTTACAGACATACCCTACGCCACTGCTCGAGCCTTCAAGATCATCCGTGAG
GCCTACAAGAAGTACATCACTGCCCATGGACTGCCTCCCACTGCCTCAGCCCTGGGCCCTGGCCCGCCACCTCCTGAGCC
TCTCCCCGGCTCTGGGCCCCGAGCCTTGCGTCAGAAAATTGTCATCAAATGA

Library Parental gene expression (RPM)
SRP021940_synovial_membrane 3 .79 RPM
SRP021940_embryo 9 .77 RPM
SRP021940_cerebellum 4 .83 RPM
SRP021940_testis 8 .06 RPM
SRP021940_placental_villous 4 .14 RPM
SRP021940_articular_cartilage 2 .60 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000000824 ortholog_many2many 1 retrogene
retro_amel_1768,
Canis familiaris ENSCAFG00000012540 ortholog_one2many 1 retrogene
retro_cfam_807,
Echinops telfairi ENSETEG00000004257 ortholog_one2many 1 retrogene
retro_etel_101,
Mustela putorius furo ENSMPUG00000004027 ortholog_one2many 1 retrogene
retro_mputfur_1542,
Mus musculus ENSMUSG00000008958 ortholog_one2many 1 retrogene
retro_mmus_1570,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_13 98.35 100.00
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Download FASTA sequences of all ENSECAG00000017754 retrocopies