Parental gene: | PPA1, ENSECAG00000018686 |
| Aliases: | None |
| Description: | pyrophosphatase (inorganic) 1 [Source:HGNC Symbol;Acc:9226] |
| Organism: | Horse (Equus caballus) |
| Coordinates: | 1:58300984..58329506(-) |
>ENSECAG00000018686
TTTGCAGAAAATGAAAAAGGACAATATATATCTCCATTTCATGATATTCCAATTTATGCAGATAAGGACGTGTTCCACAT
GGTAGTGGAAGTACCACGCTGGTCTAATGCAAAAATGGAGATTGCTACAAAGGACCCTTTAAACCCAATTAAACAAGATG
TGAAGAAAGGAAAACTTCGTTACGTTGCAAATTTGTTCCCTTATAAAGGATATATCTGGAACTATGGTGCCATCCCTCAG
ACTTGGGAAGACCCAGGACATAATGACCAACACACTGGCTGTTGTGGTGACAATGACCCAATTGATGTGTGTGAAATTGG
AAGCAAGGTATGTGCAAGAGGTGAAATAATCGCGGTGAAAGTTCTGGGCATCTTGGCTATGATTGATGAAGGGGAAACCG
ACTGGAAAGTCATTGCCATTAATGTGGATGATCCTGACGCAGCCAATTATAATGATATTAATGATGTCAAGCGGCTGAAA
CCTGGTTACCTAGAAGCTACTGTGGACTGGTTTAGAAGGTACAAGGTTCCTGATGGAAAACCAGAGAACCAGTTTGCTTT
CAATGCAGAATTTAAAGATAAGGACTTTGCAATTGATATTATTAAAAGCACTCACGATTATTGGAGAGCACTGGTGACGA
AGAAAATCGATGGAAAAGGAATCAGTTGCATAAATACCACGGTGTCTGAGAGCCCCTTCAAGTGTGATCCTGATGCTGCC
AAAGCCATTGTGGATGCTTTACCACCGCCATGTGAATCTGCCTGCACAGTACCAACAGATGTGGATAAGTGGTTCCATCA
CCAGAAAAACTAA
TTTGCAGAAAATGAAAAAGGACAATATATATCTCCATTTCATGATATTCCAATTTATGCAGATAAGGACGTGTTCCACAT
GGTAGTGGAAGTACCACGCTGGTCTAATGCAAAAATGGAGATTGCTACAAAGGACCCTTTAAACCCAATTAAACAAGATG
TGAAGAAAGGAAAACTTCGTTACGTTGCAAATTTGTTCCCTTATAAAGGATATATCTGGAACTATGGTGCCATCCCTCAG
ACTTGGGAAGACCCAGGACATAATGACCAACACACTGGCTGTTGTGGTGACAATGACCCAATTGATGTGTGTGAAATTGG
AAGCAAGGTATGTGCAAGAGGTGAAATAATCGCGGTGAAAGTTCTGGGCATCTTGGCTATGATTGATGAAGGGGAAACCG
ACTGGAAAGTCATTGCCATTAATGTGGATGATCCTGACGCAGCCAATTATAATGATATTAATGATGTCAAGCGGCTGAAA
CCTGGTTACCTAGAAGCTACTGTGGACTGGTTTAGAAGGTACAAGGTTCCTGATGGAAAACCAGAGAACCAGTTTGCTTT
CAATGCAGAATTTAAAGATAAGGACTTTGCAATTGATATTATTAAAAGCACTCACGATTATTGGAGAGCACTGGTGACGA
AGAAAATCGATGGAAAAGGAATCAGTTGCATAAATACCACGGTGTCTGAGAGCCCCTTCAAGTGTGATCCTGATGCTGCC
AAAGCCATTGTGGATGCTTTACCACCGCCATGTGAATCTGCCTGCACAGTACCAACAGATGTGGATAAGTGGTTCCATCA
CCAGAAAAACTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP021940_synovial_membrane | 13 .07 RPM |
| SRP021940_embryo | 19 .64 RPM |
| SRP021940_cerebellum | 60 .29 RPM |
| SRP021940_testis | 18 .54 RPM |
| SRP021940_placental_villous | 20 .54 RPM |
| SRP021940_articular_cartilage | 3 .01 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000014033 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000014861 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000004048 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000016098 | ortholog_one2one | 1 retrogene | |
| Procavia capensis | ENSPCAG00000006788 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000029405 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ecab_691 | 84.91 | 58.89 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSECAG00000018686 retrocopies