Parental gene: | EIF4E2, ENSECAG00000020187 |
| Aliases: | None |
| Description: | eukaryotic translation initiation factor 4E family member 2 [Source:HGNC Symbol;Acc:3293] |
| Organism: | Horse (Equus caballus) |
| Coordinates: | 6:19593095..19607277(+) |
>ENSECAG00000020187
ATGAACAACAAGTTCGACGCATTGAAAGATGATGACAGTGGGGACCATGATCAGAATGAAGAAAACAGCACACAGAAAGA
TGGTGAGAAGGAAAAAGCGGAACGAGACAAGAGTCAGGGCAGCAGCAAGAGGAAGGCTGTTGTCCCAGGACCAGCAGAGC
ATCCCCTGCAGTACAACTACACTTTCTGGTACTCCAGGAGAACCCCCGGCCGGCCTACCAGCTCACAGAGCTACGAACAG
AACATCAAACAGATCGGCACCTTTGCCTCTGTGGAACAGTTCTGGAGGTTTTACAGCCACATGGTACGTCCCGGGGACCT
GACGGGCCACAGTGACTTCCATCTCTTCAAAGAAGGAATTAAACCCATGTGGGAGGATGATGCAAATAAAAATGGTGGCA
AGTGGATTATTCGGCTGCGAAAGGGCTTGGCATCCCGTTGCTGGGAGAATCTCATCCTGGCCATGTTGGGGGAGCAGTTC
ATGGTTGGGGAGGAGATCTGTGGGGCTGTGGTCTCTGTCCGGTTCCAGGAGGACATTATTTCAATATGGAATAAGACTGC
CAGCGACCAAGCAACCACAGCCCGAATCCGGGATACACTTCGGCGAGTGCTTAACCTACCTCCCAACACCATTATGGAAT
ACAAAACCCACACCGACAGCATCAAAATGCCAGGCAGGCTGGGCCCCCAAAGGCTCCTTTTTCAAAACCTCTGGAAGCCG
CGGTTGAATGTGCCATG
ATGAACAACAAGTTCGACGCATTGAAAGATGATGACAGTGGGGACCATGATCAGAATGAAGAAAACAGCACACAGAAAGA
TGGTGAGAAGGAAAAAGCGGAACGAGACAAGAGTCAGGGCAGCAGCAAGAGGAAGGCTGTTGTCCCAGGACCAGCAGAGC
ATCCCCTGCAGTACAACTACACTTTCTGGTACTCCAGGAGAACCCCCGGCCGGCCTACCAGCTCACAGAGCTACGAACAG
AACATCAAACAGATCGGCACCTTTGCCTCTGTGGAACAGTTCTGGAGGTTTTACAGCCACATGGTACGTCCCGGGGACCT
GACGGGCCACAGTGACTTCCATCTCTTCAAAGAAGGAATTAAACCCATGTGGGAGGATGATGCAAATAAAAATGGTGGCA
AGTGGATTATTCGGCTGCGAAAGGGCTTGGCATCCCGTTGCTGGGAGAATCTCATCCTGGCCATGTTGGGGGAGCAGTTC
ATGGTTGGGGAGGAGATCTGTGGGGCTGTGGTCTCTGTCCGGTTCCAGGAGGACATTATTTCAATATGGAATAAGACTGC
CAGCGACCAAGCAACCACAGCCCGAATCCGGGATACACTTCGGCGAGTGCTTAACCTACCTCCCAACACCATTATGGAAT
ACAAAACCCACACCGACAGCATCAAAATGCCAGGCAGGCTGGGCCCCCAAAGGCTCCTTTTTCAAAACCTCTGGAAGCCG
CGGTTGAATGTGCCATG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP021940_synovial_membrane | 10 .84 RPM |
| SRP021940_embryo | 17 .08 RPM |
| SRP021940_cerebellum | 11 .48 RPM |
| SRP021940_testis | 9 .02 RPM |
| SRP021940_placental_villous | 17 .99 RPM |
| SRP021940_articular_cartilage | 7 .61 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000011328 | possible_ortholog | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000013786 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000135930 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000015082 | possible_ortholog | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000011269 | possible_ortholog | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000013043 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000013108 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000004455 | ortholog_one2one | 11 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ecab_300 | 95.49 | 99.59 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ecab_847 | 65.62 | 75.51 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSECAG00000020187 retrocopies