Parental gene: | CCDC94, ENSECAG00000022785 |
| Aliases: | None |
| Description: | coiled-coil domain containing 94 [Source:HGNC Symbol;Acc:25518] |
| Organism: | Horse (Equus caballus) |
| Coordinates: | 7:2584093..2597915(+) |
>ENSECAG00000022785
ATGTCGGAGCGGAAGGTTTTAAACAAATACTACCCTCCCGACTTTGACCCGTCCAAGATCCCCAAGCTCAAGCTGCCCAA
AGACCGGCAGTACGTGGTGCGGTTGATGGCCCCCTTCAACATGAGATGTAAGACGTGTGGGGAGTACATCTACAAGGGCA
AGAAGTTCAACGCGCGCAAAGAGACCGTGCAGAACGAGGCCTACCTGGGCCTGCCCATCTTCCGCTTCTACATCAAGTGC
ACGCGCTGCCTGGCAGAGATCACCTTCAAGACAGACCCCGAGAACACAGACTACACCATGGAGCACGGGGCCACGCGGAA
CTTCCAGGCCGAGAAGCTCCTGGAGGAGGAGGAGAAGAGGGTGCAGAAGGAGCGCGAGGACGAGGAGCTGAACAACCCCA
TGAAGGTGCTGGAGAACCGAACCAAGGACTCGAAGCTGGAGATGGAAGTGCTGGAGAACCTGCAGGAGCTCAAGGACCTG
AACCAGCGGCAGGCGCACGTGGACTTCGAGGCCATGCTGCGCCAGCACCGCCTGTCGGAGGAGGAGCGGCAGAAGCAGGA
GCAGGAGGAGGACGAGAGGGAGACGGCGGCCTTGGTGGAGGAATCCAGGAAGCGAAGGCTGCTGGAAGACTCGGATTCAG
AGGAGGAGGACGCCCCCGCCCCACCCCGGCCAGCCCTCCGGCCCAACCCCACCGCCATCCTGGACGAGGCCCCGAAAGCC
AAGAGGAAGGCAGAGAGCTGGGAGCGGAGCGTCGGCACCCTTGGCAGCAGGCCCCAGCTGTCGGGCCTGGTCGTGGTGAA
GAAAACAGACCTGGACCAGAGCGCCCGGCGGGACCCTGCCGCATCCGCCCCTGGCGCCGTGCACAACGGGAAGGCAGCTG
GCCCTGCCGCCCGGGCGCCCGGCGCCTCGTCCCTGAACCAGCTCGGCGTGTATTCGGACAGCGACGACAGCAGCGGCAGC
AACTGA
ATGTCGGAGCGGAAGGTTTTAAACAAATACTACCCTCCCGACTTTGACCCGTCCAAGATCCCCAAGCTCAAGCTGCCCAA
AGACCGGCAGTACGTGGTGCGGTTGATGGCCCCCTTCAACATGAGATGTAAGACGTGTGGGGAGTACATCTACAAGGGCA
AGAAGTTCAACGCGCGCAAAGAGACCGTGCAGAACGAGGCCTACCTGGGCCTGCCCATCTTCCGCTTCTACATCAAGTGC
ACGCGCTGCCTGGCAGAGATCACCTTCAAGACAGACCCCGAGAACACAGACTACACCATGGAGCACGGGGCCACGCGGAA
CTTCCAGGCCGAGAAGCTCCTGGAGGAGGAGGAGAAGAGGGTGCAGAAGGAGCGCGAGGACGAGGAGCTGAACAACCCCA
TGAAGGTGCTGGAGAACCGAACCAAGGACTCGAAGCTGGAGATGGAAGTGCTGGAGAACCTGCAGGAGCTCAAGGACCTG
AACCAGCGGCAGGCGCACGTGGACTTCGAGGCCATGCTGCGCCAGCACCGCCTGTCGGAGGAGGAGCGGCAGAAGCAGGA
GCAGGAGGAGGACGAGAGGGAGACGGCGGCCTTGGTGGAGGAATCCAGGAAGCGAAGGCTGCTGGAAGACTCGGATTCAG
AGGAGGAGGACGCCCCCGCCCCACCCCGGCCAGCCCTCCGGCCCAACCCCACCGCCATCCTGGACGAGGCCCCGAAAGCC
AAGAGGAAGGCAGAGAGCTGGGAGCGGAGCGTCGGCACCCTTGGCAGCAGGCCCCAGCTGTCGGGCCTGGTCGTGGTGAA
GAAAACAGACCTGGACCAGAGCGCCCGGCGGGACCCTGCCGCATCCGCCCCTGGCGCCGTGCACAACGGGAAGGCAGCTG
GCCCTGCCGCCCGGGCGCCCGGCGCCTCGTCCCTGAACCAGCTCGGCGTGTATTCGGACAGCGACGACAGCAGCGGCAGC
AACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP021940_synovial_membrane | 11 .01 RPM |
| SRP021940_embryo | 14 .17 RPM |
| SRP021940_cerebellum | 19 .58 RPM |
| SRP021940_testis | 76 .80 RPM |
| SRP021940_placental_villous | 8 .32 RPM |
| SRP021940_articular_cartilage | 7 .67 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Monodelphis domestica | ENSMODG00000000841 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000003208 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000001662 | ortholog_one2many | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000010428 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ecab_347 | 55.00 | 64.49 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSECAG00000022785 retrocopies