Parental gene: | FUCA1, ENSECAG00000024652 |
| Aliases: | None |
| Description: | fucosidase, alpha-L- 1, tissue [Source:HGNC Symbol;Acc:4006] |
| Organism: | Horse (Equus caballus) |
| Coordinates: | 2:31122225..31134532(+) |
>ENSECAG00000024652
GCGCTCAGCACTCCGCCGCCCGCCGGGGCTCAGCGCCGCTACACCCCGGACTGGCCGAGTCTGGACTCCCGGCCGCTGCC
GGGCTGGTTCGACGAGGCCAAGTTCGGGGTGTTCCTGCACTGGGGCGTGTTCTCGGTGCCGGCCTGGGGCAGCGAGTGGT
TCTGGTGGCACTGGAAGGGCGAGGGGCGGCCGCAGTACCAGCGCTTCATGAGCGACAACTACCCGCCCGGCTTCAGCTAC
GCCGACTTCGGGCCGCAGTTCACGACGCGCTTCTTCCACCCAGACAGCTGGGCGGACCTCTTCCAGGCCGCCGGGGCCAA
GTATGTGGTCCTGACCACAAAGCATCACGAAGGCTACACAAACTGGCCGAGTCCTGTGTCTTGGAACTGGAACTCTGTGG
ATGTGGGGCCCCATCGTGATTTGGTTGGTGAGCTGGGAGCAGCCATCCGGAAGAGGAACATACGCTATGGACTCTATCAC
TCGCTCTTAGAATGGTTCCATCCCCTCTACCTACTTGATAAGAAAAATGGCTTCAAAACACAGCATTTTGTCAGTGCGAA
AACAATGCCAGAGCTATACGACCTTGTTAACAGGTACAAACCTGACTTGATTTGGTCTGACGGAGACTGGGAAAGTCCTG
ATACGTACTGGAACGCGACGTATTTCCTGTCTTGGCTCTACAACGATAGCCCAGTCAAGGATGTGGTGGTAGTAAATGAT
CGATGGGGTCAGAACTGTTCCTGTCACCATGGAGGATACTACAACTGCCAAGATAAATTCAAGCCAAAGAGCTTGCCAGA
TCACAAGTGGGAGATGTGCACCTCCATCGACAAGTACTCCTGGGGCTATCGTCGCGACATGGTGATGTCTGACATTACAA
CTGAATTTGAGATCATTTCAGAACTGATTCAGACAGTAAGTTTGGGAGGCAACTATCTTCTCAACGTTGGACCAACTAAA
GATGGCCTGATTGTCCCCATCTTCCAAGAAAGGCTCCTTGCTGTTGGGAAGTGGCTGAGCATCAACGGGGAGGCTATCTA
TGCCTCTAAACCATGGAGGGTACAACTGGAAAACAACATGACGTCTGTGTGGTATACCTCAAAAGGATCAACTGTTTATG
CCATTTTCCTGAACTGGCCAGAAAATGGAGTCTTAAGCCTTAAATCCCCCATAACTACCTCGACTACACAGATAGTGATG
CTGGGAATCCAAAAAGATCTGAAGTGGTCCACAGATCCAGTTGAAGGTCTCCTCATTCTTCTGCCCCAGTTACCACCCTC
TGCTCTCCCAGCTGAGTTTGCTTGGACTGTGAAGCTGACAGGAGTGAAGTGA
GCGCTCAGCACTCCGCCGCCCGCCGGGGCTCAGCGCCGCTACACCCCGGACTGGCCGAGTCTGGACTCCCGGCCGCTGCC
GGGCTGGTTCGACGAGGCCAAGTTCGGGGTGTTCCTGCACTGGGGCGTGTTCTCGGTGCCGGCCTGGGGCAGCGAGTGGT
TCTGGTGGCACTGGAAGGGCGAGGGGCGGCCGCAGTACCAGCGCTTCATGAGCGACAACTACCCGCCCGGCTTCAGCTAC
GCCGACTTCGGGCCGCAGTTCACGACGCGCTTCTTCCACCCAGACAGCTGGGCGGACCTCTTCCAGGCCGCCGGGGCCAA
GTATGTGGTCCTGACCACAAAGCATCACGAAGGCTACACAAACTGGCCGAGTCCTGTGTCTTGGAACTGGAACTCTGTGG
ATGTGGGGCCCCATCGTGATTTGGTTGGTGAGCTGGGAGCAGCCATCCGGAAGAGGAACATACGCTATGGACTCTATCAC
TCGCTCTTAGAATGGTTCCATCCCCTCTACCTACTTGATAAGAAAAATGGCTTCAAAACACAGCATTTTGTCAGTGCGAA
AACAATGCCAGAGCTATACGACCTTGTTAACAGGTACAAACCTGACTTGATTTGGTCTGACGGAGACTGGGAAAGTCCTG
ATACGTACTGGAACGCGACGTATTTCCTGTCTTGGCTCTACAACGATAGCCCAGTCAAGGATGTGGTGGTAGTAAATGAT
CGATGGGGTCAGAACTGTTCCTGTCACCATGGAGGATACTACAACTGCCAAGATAAATTCAAGCCAAAGAGCTTGCCAGA
TCACAAGTGGGAGATGTGCACCTCCATCGACAAGTACTCCTGGGGCTATCGTCGCGACATGGTGATGTCTGACATTACAA
CTGAATTTGAGATCATTTCAGAACTGATTCAGACAGTAAGTTTGGGAGGCAACTATCTTCTCAACGTTGGACCAACTAAA
GATGGCCTGATTGTCCCCATCTTCCAAGAAAGGCTCCTTGCTGTTGGGAAGTGGCTGAGCATCAACGGGGAGGCTATCTA
TGCCTCTAAACCATGGAGGGTACAACTGGAAAACAACATGACGTCTGTGTGGTATACCTCAAAAGGATCAACTGTTTATG
CCATTTTCCTGAACTGGCCAGAAAATGGAGTCTTAAGCCTTAAATCCCCCATAACTACCTCGACTACACAGATAGTGATG
CTGGGAATCCAAAAAGATCTGAAGTGGTCCACAGATCCAGTTGAAGGTCTCCTCATTCTTCTGCCCCAGTTACCACCCTC
TGCTCTCCCAGCTGAGTTTGCTTGGACTGTGAAGCTGACAGGAGTGAAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP021940_synovial_membrane | 46 .56 RPM |
| SRP021940_embryo | 24 .73 RPM |
| SRP021940_cerebellum | 21 .19 RPM |
| SRP021940_testis | 23 .40 RPM |
| SRP021940_placental_villous | 168 .05 RPM |
| SRP021940_articular_cartilage | 32 .35 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000012304 | ortholog_one2one | 2 retrogenes | |
| Loxodonta africana | ENSLAFG00000015305 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000007213 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000013160 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ecab_450 | 72.88 | 53.27 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSECAG00000024652 retrocopies