Parental gene: | CCNB1, ENSEEUG00000005724 |
| Aliases: | None |
| Description: | cyclin B1 [Source:HGNC Symbol;Acc:1579] |
| Organism: | Hedgehog (Erinaceus europaeus) |
| Coordinates: | GeneScaffold_3750:392..7124(+) |
>ENSEEUG00000005724
ATGGCCCTCCGGGTCACCAGGAACACGAAGATTGCTGCTGAAAATAAGGCGAAGATCAGTATGGCAGGCGCCAAGCGAGT
GCCTGTGGGCGCCGTGGCTGCGTCCAAGGTGGGCCTGAGACCGAGAATGGCCCTCGGAGACATAGGCAACAAAGTCAGCG
AGCAGCCACAGGCCAAAATGCCTCTGAAAAAGGAAACAAAAGCTTTAGCTGTTGGCAGAGGAATCGCTAAAAAACTACCA
AAACCTGTGGAAAAGGAACCCATGCCTTTGGAGCGAGAGTCCAAACCTGAGCTAGAACCTGAGCCCCCGAGAGAAGAAAA
GCTCTCACCCGAGCCTATTTTGGTGGATACTCCCTCTGCAAGTCCAATGGAGACATCTGGGTGTGCTCCAGCAGAAGAAG
ATCTGTGCCAAGCTTTCTCTGATGTAATTCTTGCTGTGAGTGATGTGGATGCAGAAGATGGAGCTGACCCAAACCTCTGT
AGTGAATATGTGAAAGATATCTATGTTTATCTGAGACAACTTGAGGAAGAACAAGCAGTTAAGCCAAAATACCTACTGGG
TCGAGAAGTCACGGGAAACATGAGAGCCATCTTAATTGACTGGCTAGTGCAGGTTCAAATGAAATTCAGGTTGCTGCAGG
AGACTATGTATATGACTGTTTCTATTATTGATCGGTTCATGCAGAACAATTGTGTGCCCAAGAAGATGCTGCAGCTGGTT
GGTGTTACTGCTATGTTTGTTGCAAGCAAATATGAAGAAATGTACCCTCCAGAAATTGGCGACTTTGCCTTTGTGACTGA
TAATACCTATACTAAGCACCAAATCAGACAGATGGAAATGAAGATTCTAAGAGCTTTAAATTTTGGTTTGGGTCGCCCTC
TGCCTCTGCACTTCCTTCGTAGAGCATCTAAGATTGGAGAGACAGTGCACTTTTATCCTTCTCAAATTGCGGCAAGAGCT
TTTTGCTTAGCACAGAAAATTCTCAATAATGATAAACTAACTCTACAGCATTACCTGTCACACACTGAGGAATATTTTCC
TGTTGTGCAACATCTGGCTAAGAACATAGTCGGACTCATGAAGAAGAACAGGTATGCCACATCTAAGGGTCCAATGATCA
GCACTCTAGCACACCTGAATTCTGCTTTAGTTCAAAATTCTGCAAAGATTGTGAATGTTTAC
ATGGCCCTCCGGGTCACCAGGAACACGAAGATTGCTGCTGAAAATAAGGCGAAGATCAGTATGGCAGGCGCCAAGCGAGT
GCCTGTGGGCGCCGTGGCTGCGTCCAAGGTGGGCCTGAGACCGAGAATGGCCCTCGGAGACATAGGCAACAAAGTCAGCG
AGCAGCCACAGGCCAAAATGCCTCTGAAAAAGGAAACAAAAGCTTTAGCTGTTGGCAGAGGAATCGCTAAAAAACTACCA
AAACCTGTGGAAAAGGAACCCATGCCTTTGGAGCGAGAGTCCAAACCTGAGCTAGAACCTGAGCCCCCGAGAGAAGAAAA
GCTCTCACCCGAGCCTATTTTGGTGGATACTCCCTCTGCAAGTCCAATGGAGACATCTGGGTGTGCTCCAGCAGAAGAAG
ATCTGTGCCAAGCTTTCTCTGATGTAATTCTTGCTGTGAGTGATGTGGATGCAGAAGATGGAGCTGACCCAAACCTCTGT
AGTGAATATGTGAAAGATATCTATGTTTATCTGAGACAACTTGAGGAAGAACAAGCAGTTAAGCCAAAATACCTACTGGG
TCGAGAAGTCACGGGAAACATGAGAGCCATCTTAATTGACTGGCTAGTGCAGGTTCAAATGAAATTCAGGTTGCTGCAGG
AGACTATGTATATGACTGTTTCTATTATTGATCGGTTCATGCAGAACAATTGTGTGCCCAAGAAGATGCTGCAGCTGGTT
GGTGTTACTGCTATGTTTGTTGCAAGCAAATATGAAGAAATGTACCCTCCAGAAATTGGCGACTTTGCCTTTGTGACTGA
TAATACCTATACTAAGCACCAAATCAGACAGATGGAAATGAAGATTCTAAGAGCTTTAAATTTTGGTTTGGGTCGCCCTC
TGCCTCTGCACTTCCTTCGTAGAGCATCTAAGATTGGAGAGACAGTGCACTTTTATCCTTCTCAAATTGCGGCAAGAGCT
TTTTGCTTAGCACAGAAAATTCTCAATAATGATAAACTAACTCTACAGCATTACCTGTCACACACTGAGGAATATTTTCC
TGTTGTGCAACATCTGGCTAAGAACATAGTCGGACTCATGAAGAAGAACAGGTATGCCACATCTAAGGGTCCAATGATCA
GCACTCTAGCACACCTGAATTCTGCTTTAGTTCAAAATTCTGCAAAGATTGTGAATGTTTAC
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 0 .16 RPM |
| SRP017611_kidney | 0 .94 RPM |
| SRP017611_brain | 1 .61 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000014239 | ortholog_one2one | 2 retrogenes | |
| Canis familiaris | ENSCAFG00000007705 | possible_ortholog | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000016075 | possible_ortholog | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000014629 | possible_ortholog | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000014648 | possible_ortholog | 1 retrogene | |
| Procavia capensis | ENSPCAG00000002451 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000007685 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000011817 | possible_ortholog | 4 retrogenes | |
| Tarsius syrichta | ENSTSYG00000008928 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_eeur_386 | 86.14 | 51.02 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_eeur_548 | 83.40 | 58.38 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSEEUG00000005724 retrocopies