Parental gene:

RAB11B, ENSEEUG00000009165

Aliases:None
Description:RAB11B, member RAS oncogene family [Source:HGNC Symbol;Acc:9761]
Organism:Hedgehog (Erinaceus europaeus)
Coordinates:GeneScaffold_7919:189..6095(+)


>ENSEEUG00000009165
ATGGGGACCCGGGACGATGAGTACGACTACCTATTCAAAGTCGTCCTTATTGGAGATTCTGGCGTCGGGAAGAGTAACCT
CCTGTCCCGATTTACTCGAAATGAGTTTAATCTCGAGAGCAAGAGCACCATCGGGGTGGAGTTCGCCACGCGGAGCATCC
AGGTGGACGGCAAGACCATCAAAGCGCAGATCTGGGACACGGCCGGCCAGGAGCGCTACCGCGCCATCACGTCTGCGTAC
TACCGCGGAGCCGTGGGCGCCTTGCTGGTGTACGACATCGCCAAACACCTCACCTACGAGAACGTGGAGCGCTGGCTGAA
GGAGCTGCGTGACCACGCCGACAGCAACATCGTCATCATGCTGGTGGGCAACAAGAGCGACCTGCGCCACCTGCGCGCCG
TGCCCACCGACGAGGCCCGCGCCTTCGCG

Library Parental gene expression (RPM)
SRP017611_liver 1 .13 RPM
SRP017611_kidney 8 .81 RPM
SRP017611_brain 3 .06 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000013525 ortholog_one2one 1 retrogene
retro_chof_1582,
Callithrix jacchus ENSCJAG00000010778 ortholog_one2one 2 retrogenes
retro_cjac_3866, retro_cjac_3917,
Erinaceus europaeus ENSEEUG00000007700 within_species_paralog 1 retrogene
retro_eeur_496,
Mus musculus ENSMUSG00000077450 ortholog_one2one 1 retrogene
retro_mmus_1846,
Otolemur garnettii ENSOGAG00000003227 ortholog_one2one 1 retrogene
retro_ogar_2405,
Petromyzon marinus ENSPMAG00000009335 ortholog_one2one 1 retrogene
retro_pmar_25,
Pteropus vampyrus ENSPVAG00000009645 ortholog_one2one 1 retrogene
retro_pvam_64,
Tupaia belangeri ENSTBEG00000000667 ortholog_one2one 1 retrogene
retro_tbel_4634,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_eeur_284 89.13 63.64
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2. retro_eeur_565 99.30 100.00
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Download FASTA sequences of all ENSEEUG00000009165 retrocopies