Parental gene: | PDK3, ENSEEUG00000014090 |
| Aliases: | None |
| Description: | pyruvate dehydrogenase kinase, isozyme 3 [Source:HGNC Symbol;Acc:8811] |
| Organism: | Hedgehog (Erinaceus europaeus) |
| Coordinates: | GeneScaffold_616:29639..122528(+) |
>ENSEEUG00000014090
AGAGACAATGCCTGTGAGAAAACATCATACATGTTTCTACGGAAGGAACTACCTGTGCGCCTAGCCAATACCATGAGAGA
GGTTAATCTTCTGCCAGACAATTTGTTAAACCGGCCTTCGGTAGGCTTGGTACAGAGTTGGTACATGCAGAGTTTCCTTG
AGCTCTTAGAATATGAGAACAAGAGCCCTGAGGACCCACAGGTCTTGGACAACTTTCTACAGGTTCTGATTAATGTCAGA
AATAGACACAATGATGTGGTTCCTACAATGGCACAAGGAGTGATCGAATACAAAGAAAAGTTTGGCTTTGATCCATTCAT
TAGTAGTAACATCCAATACTTTCTGGATCGGTTTTATACCAACCGCATCTCTTTCCGCATGCTTATTAACCAGCACACAC
TCCTATTTGGCGGCGACACCAATCCTGCTCACCCTAAACACATCGGAAGTATTGATCCCACCTGCAATGTCGCTGATGTA
GTGAAAGATGCATATGAAACCGCCAAGATGCTGTGTGAACAGTATTACCTGGTTGCTCCAGAACTGGAAATCGAAGAATT
TAATGCCAAAGCTCCAGACAAACCTATTCAGGTAGTTTATGTGCCCTCACATCTGTTTCACATGCTATTTGAGTTGTTCA
AGAACTCAATGAGAGCAACAGTCGAACTATATGAAGATAGAAAGGAGGCTTACCCTGCTGTTAAGACACTCGTCACTCTT
GGTAAAGAAGACTTGTCCATTAAGATAAGTGACCAAGGTGGTGGGGTCCCACTTCGAAAAATAGATCGTCTTTTTAACTA
CATGTATTCAACTGCTCCCAGACCCAGCCTCGAGCCCACAAGAGCTGCCCCTCTGGCTGGATTTGGATATGGTTTGCCAA
TTTCTCGTCTGTATGCTAGATATTTTCAAGGAGACTTAAAACTCTATTCCATGGAAGGAGTGGGCACTGATGCCGTCATT
TACTTGAAGGCTCTTTCAAGTGAATCATTTGAGAGACTTCCAGTCTTCAACAAGTCTGCATGGCGCCATTATAAGACCAC
ACCTGAAGCTGATGATTGGAGCAACCCCAGCAGCGAACCCCGAGATGCTTCAAAATACAAAGTGAAACAGTAA
AGAGACAATGCCTGTGAGAAAACATCATACATGTTTCTACGGAAGGAACTACCTGTGCGCCTAGCCAATACCATGAGAGA
GGTTAATCTTCTGCCAGACAATTTGTTAAACCGGCCTTCGGTAGGCTTGGTACAGAGTTGGTACATGCAGAGTTTCCTTG
AGCTCTTAGAATATGAGAACAAGAGCCCTGAGGACCCACAGGTCTTGGACAACTTTCTACAGGTTCTGATTAATGTCAGA
AATAGACACAATGATGTGGTTCCTACAATGGCACAAGGAGTGATCGAATACAAAGAAAAGTTTGGCTTTGATCCATTCAT
TAGTAGTAACATCCAATACTTTCTGGATCGGTTTTATACCAACCGCATCTCTTTCCGCATGCTTATTAACCAGCACACAC
TCCTATTTGGCGGCGACACCAATCCTGCTCACCCTAAACACATCGGAAGTATTGATCCCACCTGCAATGTCGCTGATGTA
GTGAAAGATGCATATGAAACCGCCAAGATGCTGTGTGAACAGTATTACCTGGTTGCTCCAGAACTGGAAATCGAAGAATT
TAATGCCAAAGCTCCAGACAAACCTATTCAGGTAGTTTATGTGCCCTCACATCTGTTTCACATGCTATTTGAGTTGTTCA
AGAACTCAATGAGAGCAACAGTCGAACTATATGAAGATAGAAAGGAGGCTTACCCTGCTGTTAAGACACTCGTCACTCTT
GGTAAAGAAGACTTGTCCATTAAGATAAGTGACCAAGGTGGTGGGGTCCCACTTCGAAAAATAGATCGTCTTTTTAACTA
CATGTATTCAACTGCTCCCAGACCCAGCCTCGAGCCCACAAGAGCTGCCCCTCTGGCTGGATTTGGATATGGTTTGCCAA
TTTCTCGTCTGTATGCTAGATATTTTCAAGGAGACTTAAAACTCTATTCCATGGAAGGAGTGGGCACTGATGCCGTCATT
TACTTGAAGGCTCTTTCAAGTGAATCATTTGAGAGACTTCCAGTCTTCAACAAGTCTGCATGGCGCCATTATAAGACCAC
ACCTGAAGCTGATGATTGGAGCAACCCCAGCAGCGAACCCCGAGATGCTTCAAAATACAAAGTGAAACAGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 1 .45 RPM |
| SRP017611_kidney | 96 .02 RPM |
| SRP017611_brain | 20 .95 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000017832 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000005598 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_eeur_100 | 90.00 | 56.76 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_eeur_690 | 87.91 | 73.78 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSEEUG00000014090 retrocopies