Parental gene:

SEC11A, ENSEEUG00000015328

Aliases:None
Description:SEC11 homolog A (S. cerevisiae) [Source:HGNC Symbol;Acc:17718]
Organism:Hedgehog (Erinaceus europaeus)
Coordinates:GeneScaffold_4434:3517..9214(-)


>ENSEEUG00000015328
CAGCTCTACTACCAAGTCCTCAATTTTGGGATGATTGTCTCCTCGGCACTGATGATCTGGAAGGGCTTGATGGTGGTAAC
TGGAAGTGAAAGTCCCATTGTAGTAGTGCTCAGTGGAAGCATGGAACCTGCATTTCACAGAGGAGATCTTCTGTTTCTGA
CAAATCGAGTTGAAGATCCCATCCGAGTGGGAGAAATTGTTGTTTTTAGGATAGAAGGAAGAGAGATTCCTATAGTCCAT
CGGGTCTTGAAGATTCATGAAAAGCAAAATGGAAATATCAAGTTTTTAACCAAAGGAGATAATAATGCAGTTGATGACCG
AGGTCTCTATAAGCAAGGACAACACTGGCTAGAGAAAAAAGATGTTGTGGGGAGAGCAAGG

Library Parental gene expression (RPM)
SRP017611_liver 13 .18 RPM
SRP017611_kidney 25 .32 RPM
SRP017611_brain 7 .73 RPM



Species Parental gene accession Homology type Retrogenes number
Macaca mulatta ENSMMUG00000011486 ortholog_one2one 1 retrogene
retro_mmul_2343,
Monodelphis domestica ENSMODG00000019364 ortholog_one2one 1 retrogene
retro_mdom_726,
Oryctolagus cuniculus ENSOCUG00000008205 ortholog_one2one 1 retrogene
retro_ocun_849,
Otolemur garnettii ENSOGAG00000007281 ortholog_one2one 1 retrogene
retro_ogar_3315,
Ictidomys tridecemlineatus ENSSTOG00000019948 ortholog_one2one 1 retrogene
retro_itri_206,
Tupaia belangeri ENSTBEG00000012320 ortholog_one2one 3 retrogenes
retro_tbel_1139, retro_tbel_2280, retro_tbel_745,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_eeur_314 76.56 100.00
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2. retro_eeur_412 82.03 100.00
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Download FASTA sequences of all ENSEEUG00000015328 retrocopies