Parental gene:

HMGCS1, ENSETEG00000003583

Aliases:None
Description:3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) [Source:HGNC Symbol;Acc:5007]
Organism:Lesser hedgehog tenrec (Echinops telfairi)
Coordinates:GeneScaffold_2319:42516..52321(-)


>ENSETEG00000003583
ATGCCTGGGTCACTTCCTTTGAATGCAGAAGCCTGCTGGCCAAAAGACGTGGGGATTGTTGCCCTGGAAATTTACTTTCC
TTCCCAGTACGTTGATCAATCAGAGCTGGAAAAGTATGATGGTGTAGACGCTGGAAAGTATACCATTGGTTTGGGCCAGG
CCAAGATGGGTTTCTGCACCGATAGAGAAGATATCAACTCTCTTTGCTTGACTGCGGTTCAGAATCTTATGGAGAGAAAC
AACCTTTCCTATGACTGCATTGGGCGTCTGGAAGTTGGGACAGAGACCATCATCGACAAATCAAAGTCAGTGAAGACTAA
TTTGATGCAGCTATTTGAGGAGTCTGGGAATACCGATATAGAAGGAATAGATACAACGAATGCATGCTATGGAGGCACGG
CTGCTGTCTTCAATGCCATTAACTGGATTGAGTCCAGCTCCTGGGATGGACGGTATGCCCTGGTAGTTGCCGGAGATATT
GCTGTATATGCCACAGGAAATGCTAGGCCAACCGGTGGAGTGGGAGCCGTTGCTTTGCTAATTGGGCCAAATGCTCCTTT
AATTTTTGAACGAGGGCTTCGTGGAACCCATATGCAGCATGCTTATGACTTTTACAAGCCTGATATGCTCTCAGAGTATC
CTATAGTGGATGGCAAGCTCTCCATACAATGCTACCTCAGTGCCTTAGACCGCTGCTATTATGTCTACCGCAAAAAGATC
CGGGCCCAACAGAAGGAGGGAAATGATAAAGATTTCACTTTGAATGACTTTGGCTTCATGATCTTCCACTCACCATATTG
CAAACTGGTTCAGAAATCTCTAGCTCGGATGCTGTTGAATGACTTTCTGAATGACCAGAACAGAGATAAAAATAGTGTCT
ATAGTGGCCTAGAANNNNNNNNGGATGTTAAATTAGAAGATACTTACTTTGATAGAGATGTGGAAAAGGCATTTATGAAG
GCTAGTTCTGAACTCTTTAATCAGAAAACAAAGGCATCTTTGCTTGTATCAAATCAAATTGGAAATATGTACACATCTTC
AGTCTATGGTTCCCTTGCTTCTGTGCTAGCACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTCTGCTCTTGATAAAATA
ACAGCAAGTTTATGTGACCTTAAATCAAGGCTTGACTCAAGAACTTGTGTGGCACCAGATGTCTTTGCTGAAACCATGAA
GCTCAGAGAGGACACTCATCACTTAGTCAACCATATTCCCCAGGGTTCAATCGATTCACTCTTTGAAGGAACATGGTACC
TGGTTAGAGTGGATGAAATGCACCGAAGAACCTATGCTCGGCGCCCCTCACCAAATGATGACACTTTGGAGGAAGGAGTA
GCACTTGTGCATTCAAGCACAGCAACTGAACAT

Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000001303 ortholog_one2one 1 retrogene
retro_cjac_1754,
Echinops telfairi ENSETEG00000005380 within_species_paralog 1 retrogene
retro_etel_2037,
Homo sapiens ENSG00000112972 ortholog_one2one 1 retrogene
retro_hsap_328,
Pongo abelii ENSPPYG00000015439 ortholog_one2one 1 retrogene
retro_pabe_361,
Pan troglodytes ENSPTRG00000016845 ortholog_one2one 1 retrogene
retro_ptro_265,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_etel_526 71.94 72.51
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Download FASTA sequences of all ENSETEG00000003583 retrocopies