Parental gene: | CCT7, ENSETEG00000009409 |
| Aliases: | None |
| Description: | chaperonin containing TCP1, subunit 7 (eta) [Source:HGNC Symbol;Acc:1622] |
| Organism: | Lesser hedgehog tenrec (Echinops telfairi) |
| Coordinates: | GeneScaffold_3816:53014..97581(+) |
>ENSETEG00000009409
ATGCCCACCCCAGTTATCCTGTTGAAAGAGGGGACAGACAGCTCTCAGGGCATCTCTCAGCTCGTGAGTAACATCAGCGC
CTGCCAGGTGATCGCCGAGGCTGTGCGGACCACCCTGGGCCCTCGGGGCATGGACAAGCTCATCGTGGATGGGCGAGGCA
AAGCAACAATTTCGAATGATGGAGCCACAATTCTGAAACTCCTTGATGTTGTCCATCCTGCAGCAAAGACTTTAGTAGAC
ATTGCCAAGTCCCAAGACGCTGAGGTTGGCGACGGCACCACCTCAGTGACCCTCCTGGCCGCGGAGTTTCTCAAGCAGGT
GAAACCGTATGTGGAGGAAGGTTTGCACCCCCAGATCATCATCCGAGCTTTCCGCACCGCCACCCAATTGGCAGTTAGCA
AGATCAAAGAAATCGCCGTGACTGTGAAGAGAGAAGATAAAGTAGAGCAGAGGAAGCTGCTGGAGAAGTGTGCCAAGACC
GCGCTGAGCTCCAAGCTGATCTCCCAGCAGAAAGCCTTCTTCGCGAAGATGGTGGTTGATGCTGTGATGATGCTCGATGA
CTTGCTGCAGCTCAAGATGATTGGCATCAAGAAAGTACAAGGCGGAGCCCTGGAGGAGTCCCAGCTGGTCGCTGGAGTTG
CATTCAAGAAGACATTCTCTTATGCTGGGTTTGAAATGCAACCCAAAAAGTACAGTAACCCCAAGATTGCCCTGCTGAAC
GTGGAGCTGGAACTGAAAGCCGAGAAGGACAACGCTGAGGTCCGAGTGCACACAGTGGAGGATTATCAGGCAATTGTTGA
TGCAGAGTGGGACATTCTCTATGACAAGCTGGAGAAGATCCATCGTTCTGGAGCCAAAGTTGTCTTGTCCAAACTCCCTA
TCGGGGATGTGGCCACCCAGTACTTTGCTGACCGGGACATGTTCTGTGCTGGCCGAGTGCCCGAAGAGGATCTGAAGAGA
ACAATGATGTGCGGAGGCTCCATCCAGACCAGTGTGAACGCTCTGTCCGCAGAAGTGCTGGGCAGCTGCCAGGGCTTCGA
GGAGACCCAGATTGGAAGCGAGAGGTACAATTTCTTCACTGGCTGCCCGAAGGCCAAGACCTGCACGATCATCCTCCGCG
GTGGTGCTGTGCAGTTTATGGAGGAGACAGAGCGGTCCTTGCATGACGCCATCATGATTGTCAGGCGCGCCATCAAGAAC
GATTCTGGGGTGGCTGGTGGTGGGGCCATTGAGATGGAGCTCTCCAAGTACCTTCGGGATTACTCCAGGACCATCCCCGG
GAAGCAGCAGCTGCTGATCCGGGCCTATGCCAAGGCCTTGGAGATCATCCCACGCCAGCTGTGCGACAACACGGGCTTCG
ATGCCACAAACATCCTCAACAAGCTAGCGCGGCATGCCCAGGAAGGCATGTGGTACGGGGTGGACATCAACAACGAGGAC
ATTGCTGACAACTTCGAGGCCTTCGTGTGGGAGCCAGCGATGGTGCGCGTCAATGCCCTGACGGCAGCCTCAGAGGCCGT
GTGCCTCATCGTGTCTGTAGATGAAACCATCAAGAACCCTCGCTCCACTGTGGACGCTCCACCACCTGGGGTCCGGGGCC
GGGGCTGGGGCCGCCCCCATTGA
ATGCCCACCCCAGTTATCCTGTTGAAAGAGGGGACAGACAGCTCTCAGGGCATCTCTCAGCTCGTGAGTAACATCAGCGC
CTGCCAGGTGATCGCCGAGGCTGTGCGGACCACCCTGGGCCCTCGGGGCATGGACAAGCTCATCGTGGATGGGCGAGGCA
AAGCAACAATTTCGAATGATGGAGCCACAATTCTGAAACTCCTTGATGTTGTCCATCCTGCAGCAAAGACTTTAGTAGAC
ATTGCCAAGTCCCAAGACGCTGAGGTTGGCGACGGCACCACCTCAGTGACCCTCCTGGCCGCGGAGTTTCTCAAGCAGGT
GAAACCGTATGTGGAGGAAGGTTTGCACCCCCAGATCATCATCCGAGCTTTCCGCACCGCCACCCAATTGGCAGTTAGCA
AGATCAAAGAAATCGCCGTGACTGTGAAGAGAGAAGATAAAGTAGAGCAGAGGAAGCTGCTGGAGAAGTGTGCCAAGACC
GCGCTGAGCTCCAAGCTGATCTCCCAGCAGAAAGCCTTCTTCGCGAAGATGGTGGTTGATGCTGTGATGATGCTCGATGA
CTTGCTGCAGCTCAAGATGATTGGCATCAAGAAAGTACAAGGCGGAGCCCTGGAGGAGTCCCAGCTGGTCGCTGGAGTTG
CATTCAAGAAGACATTCTCTTATGCTGGGTTTGAAATGCAACCCAAAAAGTACAGTAACCCCAAGATTGCCCTGCTGAAC
GTGGAGCTGGAACTGAAAGCCGAGAAGGACAACGCTGAGGTCCGAGTGCACACAGTGGAGGATTATCAGGCAATTGTTGA
TGCAGAGTGGGACATTCTCTATGACAAGCTGGAGAAGATCCATCGTTCTGGAGCCAAAGTTGTCTTGTCCAAACTCCCTA
TCGGGGATGTGGCCACCCAGTACTTTGCTGACCGGGACATGTTCTGTGCTGGCCGAGTGCCCGAAGAGGATCTGAAGAGA
ACAATGATGTGCGGAGGCTCCATCCAGACCAGTGTGAACGCTCTGTCCGCAGAAGTGCTGGGCAGCTGCCAGGGCTTCGA
GGAGACCCAGATTGGAAGCGAGAGGTACAATTTCTTCACTGGCTGCCCGAAGGCCAAGACCTGCACGATCATCCTCCGCG
GTGGTGCTGTGCAGTTTATGGAGGAGACAGAGCGGTCCTTGCATGACGCCATCATGATTGTCAGGCGCGCCATCAAGAAC
GATTCTGGGGTGGCTGGTGGTGGGGCCATTGAGATGGAGCTCTCCAAGTACCTTCGGGATTACTCCAGGACCATCCCCGG
GAAGCAGCAGCTGCTGATCCGGGCCTATGCCAAGGCCTTGGAGATCATCCCACGCCAGCTGTGCGACAACACGGGCTTCG
ATGCCACAAACATCCTCAACAAGCTAGCGCGGCATGCCCAGGAAGGCATGTGGTACGGGGTGGACATCAACAACGAGGAC
ATTGCTGACAACTTCGAGGCCTTCGTGTGGGAGCCAGCGATGGTGCGCGTCAATGCCCTGACGGCAGCCTCAGAGGCCGT
GTGCCTCATCGTGTCTGTAGATGAAACCATCAAGAACCCTCGCTCCACTGTGGACGCTCCACCACCTGGGGTCCGGGGCC
GGGGCTGGGGCCGCCCCCATTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000008879 | possible_ortholog | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000007937 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000007766 | possible_ortholog | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000000416 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000012448 | possible_ortholog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000009162 | possible_ortholog | 2 retrogenes | |
| Tupaia belangeri | ENSTBEG00000002066 | possible_ortholog | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_etel_607 | 97.56 | 68.15 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_etel_1478 | 91.25 | 58.52 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSETEG00000009409 retrocopies