Parental gene: | GDAP2, ENSFCAG00000003468 |
| Aliases: | None |
| Description: | ganglioside induced differentiation associated protein 2 [Source:HGNC Symbol;Acc:18010] |
| Organism: | Cat (Felis catus) |
| Coordinates: | C1:98495449..98554721(-) |
>ENSFCAG00000003468
ATGGATCCCTTGGGTGCCCCTTCCCAGTTTGTGGATGTGGATACGCTACCCAGCTGGGGCGACTCATGTGAAGATGAACT
AAATACTTCCGATACTGCAGCTGAAACATTGCAAGAAAATACTGTTAGATCACCTTTTCTTTACAACAAGGATATCAGCG
GGAAAGTGATTCTTTGGAAAGGAGACGTGGCATTACTGAACTGTACGGCCATTGTGAATACCAGCAATGAAAGTCTTACA
GATAAGAACCCTGTGTCAGAGAGTATCTTCATGCTCGCAGGACCCGATTTGAAGGAGGACCTCCAGAAACTTAAGGGTTG
CCGGACAGGTGAAGCAAAATTGACGAAAGGATTTAATCTAGCTGCCCGGTTCATCATTCACACAGTGGGACCTAAGTACA
AGAGCCGCTATCGCACCGCTGCTGAGAGCTCCCTGTACAGCTGCTACAGAAACGTGCTTCAGCTGGCAAAAGAGCAGTCA
ATGTCATCTGTTGGATTCTGTGTCATCAATTCTGCAAAACGAGGTTATCCTTTAGAGGATGCAACACACATAGCACTTCG
CACTGTAAGGAGATTCCTGGAGATTCATGGGGAGACCATTGAAAAAGTAGTATTTGCTGTCTCTGAACTTGAAGAGGCTA
CTTACCAAAAGCTGCTACCTCTGTACTTCCCAAGGTCATTAAAGGAGGAATGTCGATCATTGCCATACCTACCTGCAGAT
ATTGGAAATGCAGAAGGGGAGCCTGTGGTACCTGAACGACAGATTAGAATAAGTGAAAAACCTGGTGCCCCGGAGGACAA
CCAAGAAGAGGAGGCTGAAGGCTTGGGAGTAGATCTCTCTTTCATCGGCTCTCATGCTTTTGCTCGAATGGAAGGAGATA
TTGATAAGCAGAGAAGACTGATCCTTCAGGGCCAGTTATCAGAGGCAGCCCTGCAGAAGCAGCATCAGAGAAATTATAAT
CGCTGGTTGTGTCAAGCAAGATCTGAGGATCTATCTGATATTGCTTCTCTAAAAGCCTTATACCAAACAGGTGTTGATAA
CTGTGGGCGCACAGTGATGGTGGTAGTTGGAAGAAACATTCCTGTCACATTAATAGATATGGACAAGGCTCTCTTATATT
TCATCCATGTAATGGATCACATTGCTGTGAAGGAATATGTATTAGTATATTTTCACACACTGACCAGTGAATACAATCAC
CTGGACTCTGACTTCCTGAAGAAACTCTACGATGTTGTTGATGTCAAATACAAGAGGAATTTGAAGGCTGTTTATTTTGT
TCATCCAACGTTTCGTTCAAAGGTATCAACATGGTTTTTTACCACCTTTTCTGTCTCAGGACTGAAGGACAAAATCCACC
ATGTGGACAGCCTCCACCAGCTATTTTCTGCCATATCACCAGAACAGATTGATTTTCCACCTTTTGTCCTTGAATATGAT
GCCAGGGAAAATGGGCCTTACTATACATCTTATCCCCCATCACCAGATTTGTGA
ATGGATCCCTTGGGTGCCCCTTCCCAGTTTGTGGATGTGGATACGCTACCCAGCTGGGGCGACTCATGTGAAGATGAACT
AAATACTTCCGATACTGCAGCTGAAACATTGCAAGAAAATACTGTTAGATCACCTTTTCTTTACAACAAGGATATCAGCG
GGAAAGTGATTCTTTGGAAAGGAGACGTGGCATTACTGAACTGTACGGCCATTGTGAATACCAGCAATGAAAGTCTTACA
GATAAGAACCCTGTGTCAGAGAGTATCTTCATGCTCGCAGGACCCGATTTGAAGGAGGACCTCCAGAAACTTAAGGGTTG
CCGGACAGGTGAAGCAAAATTGACGAAAGGATTTAATCTAGCTGCCCGGTTCATCATTCACACAGTGGGACCTAAGTACA
AGAGCCGCTATCGCACCGCTGCTGAGAGCTCCCTGTACAGCTGCTACAGAAACGTGCTTCAGCTGGCAAAAGAGCAGTCA
ATGTCATCTGTTGGATTCTGTGTCATCAATTCTGCAAAACGAGGTTATCCTTTAGAGGATGCAACACACATAGCACTTCG
CACTGTAAGGAGATTCCTGGAGATTCATGGGGAGACCATTGAAAAAGTAGTATTTGCTGTCTCTGAACTTGAAGAGGCTA
CTTACCAAAAGCTGCTACCTCTGTACTTCCCAAGGTCATTAAAGGAGGAATGTCGATCATTGCCATACCTACCTGCAGAT
ATTGGAAATGCAGAAGGGGAGCCTGTGGTACCTGAACGACAGATTAGAATAAGTGAAAAACCTGGTGCCCCGGAGGACAA
CCAAGAAGAGGAGGCTGAAGGCTTGGGAGTAGATCTCTCTTTCATCGGCTCTCATGCTTTTGCTCGAATGGAAGGAGATA
TTGATAAGCAGAGAAGACTGATCCTTCAGGGCCAGTTATCAGAGGCAGCCCTGCAGAAGCAGCATCAGAGAAATTATAAT
CGCTGGTTGTGTCAAGCAAGATCTGAGGATCTATCTGATATTGCTTCTCTAAAAGCCTTATACCAAACAGGTGTTGATAA
CTGTGGGCGCACAGTGATGGTGGTAGTTGGAAGAAACATTCCTGTCACATTAATAGATATGGACAAGGCTCTCTTATATT
TCATCCATGTAATGGATCACATTGCTGTGAAGGAATATGTATTAGTATATTTTCACACACTGACCAGTGAATACAATCAC
CTGGACTCTGACTTCCTGAAGAAACTCTACGATGTTGTTGATGTCAAATACAAGAGGAATTTGAAGGCTGTTTATTTTGT
TCATCCAACGTTTCGTTCAAAGGTATCAACATGGTTTTTTACCACCTTTTCTGTCTCAGGACTGAAGGACAAAATCCACC
ATGTGGACAGCCTCCACCAGCTATTTTCTGCCATATCACCAGAACAGATTGATTTTCCACCTTTTGTCCTTGAATATGAT
GCCAGGGAAAATGGGCCTTACTATACATCTTATCCCCCATCACCAGATTTGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 8 .19 RPM |
| SRP017611_kidney | 10 .10 RPM |
| SRP017611_brain | 18 .36 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000012907 | ortholog_one2one | 2 retrogenes | |
| Echinops telfairi | ENSETEG00000004391 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000027865 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_fcat_1125 | 57.04 | 52.72 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSFCAG00000003468 retrocopies