Parental gene: | SF3B4, ENSFCAG00000010106 |
| Aliases: | None |
| Description: | splicing factor 3b, subunit 4, 49kDa [Source:HGNC Symbol;Acc:10771] |
| Organism: | Cat (Felis catus) |
| Coordinates: | C1:102328325..102332748(-) |
>ENSFCAG00000010106
ATGGCGGCCGGGCCGATCTCCGAGCGGAACCAGGATGCCACTGTCTACGTGGGAGGCCTGGACGAGAAGGTTAGCGAACC
ACTGCTGTGGGAGCTATTTCTCCAGGCAGGGCCAGTAGTCAACACCCACATGCCAAAGGATAGAGTCACAGGTCAGCACC
AAGGCTATGGCTTTGTGGAATTCTTGAGTGAGGAAGATGCTGACTATGCCATTAAGATCATGAACATGATCAAACTCTAT
GGGAAACCAATACGGGTGAACAAAGCTTCAGCTCACAACAAGAACCTGGATGTGGGGGCCAACATTTTCATTGGCAACCT
GGACCCAGAGATTGATGAGAAGCTGCTTTATGATACTTTCAGCGCCTTTGGGGTCATCTTACAAACCCCCAAAATTATGC
GGGACCCTGACACAGGCAACTCCAAAGGTTATGCCTTTATTAATTTTGCTTCATTTGATGCTTCGGATGCAGCTATCGAG
GCCATGAATGGGCAGTATCTCTGTAACCGCCCTATCACTGTGTCCTATGCCTTCAAGAAGGACTCCAAGGGGGAGCGCCA
TGGCTCTGCAGCTGAAAGACTTCTGGCAGCCCAGAACCCCCTCTCCCAGGCCGACCGCCCTCATCAGCTGTTTGCAGACG
CACCTCCTCCTCCTTCTGCCCCCAATCCTGTGGTGTCATCACTGGGGTCTGGGCTTCCTCCACCAGGCATGCCTCCTCCT
GGGTCCTTCCCACCCCCAGTGCCGCCTCCTGGAGCCCTTCCACCTGGGATACCCCCAGCCATGCCCCCGCCTATGCCTCC
TGGGGCTGGAGGACATGGCCCACCATCAGCGGGAACCCCAGGGGCTGGACATCCTGGACATGGACACTCACATCCTCACC
CATTCCCACCAGGTGGGATGCCCCATCCAGGGATGTCTCAGATGCAGCTGGCTCACCATGGCCCTCACGGCTTAGGACAC
CCCCATGCCGGGCCCCCAGGCTCTGGGGGGCAGCCGCCACCCCGACCACCCCCTGGAATGCCTCATCCCGGACCTCCTCC
AATGGGCATGCCCCCTCGAGGGCCTCCGTTTGGATCTCCCATGGGTCACCCAGGTCCTATGCCTCCACATGGGATGCGTG
GGCCTCCTCCACTGATGCCTCCTCACGGGTACACTGGGCCTCCACGACCCCCACCCTACGGCTACCAGCGGGGCCCCCTG
CCTCCACCCAGACCCACCCCCCGGCCTCCAGTTCCCCCTCGTGGCCCACTTCGAGGCCCTCTTCCTCAGTAA
ATGGCGGCCGGGCCGATCTCCGAGCGGAACCAGGATGCCACTGTCTACGTGGGAGGCCTGGACGAGAAGGTTAGCGAACC
ACTGCTGTGGGAGCTATTTCTCCAGGCAGGGCCAGTAGTCAACACCCACATGCCAAAGGATAGAGTCACAGGTCAGCACC
AAGGCTATGGCTTTGTGGAATTCTTGAGTGAGGAAGATGCTGACTATGCCATTAAGATCATGAACATGATCAAACTCTAT
GGGAAACCAATACGGGTGAACAAAGCTTCAGCTCACAACAAGAACCTGGATGTGGGGGCCAACATTTTCATTGGCAACCT
GGACCCAGAGATTGATGAGAAGCTGCTTTATGATACTTTCAGCGCCTTTGGGGTCATCTTACAAACCCCCAAAATTATGC
GGGACCCTGACACAGGCAACTCCAAAGGTTATGCCTTTATTAATTTTGCTTCATTTGATGCTTCGGATGCAGCTATCGAG
GCCATGAATGGGCAGTATCTCTGTAACCGCCCTATCACTGTGTCCTATGCCTTCAAGAAGGACTCCAAGGGGGAGCGCCA
TGGCTCTGCAGCTGAAAGACTTCTGGCAGCCCAGAACCCCCTCTCCCAGGCCGACCGCCCTCATCAGCTGTTTGCAGACG
CACCTCCTCCTCCTTCTGCCCCCAATCCTGTGGTGTCATCACTGGGGTCTGGGCTTCCTCCACCAGGCATGCCTCCTCCT
GGGTCCTTCCCACCCCCAGTGCCGCCTCCTGGAGCCCTTCCACCTGGGATACCCCCAGCCATGCCCCCGCCTATGCCTCC
TGGGGCTGGAGGACATGGCCCACCATCAGCGGGAACCCCAGGGGCTGGACATCCTGGACATGGACACTCACATCCTCACC
CATTCCCACCAGGTGGGATGCCCCATCCAGGGATGTCTCAGATGCAGCTGGCTCACCATGGCCCTCACGGCTTAGGACAC
CCCCATGCCGGGCCCCCAGGCTCTGGGGGGCAGCCGCCACCCCGACCACCCCCTGGAATGCCTCATCCCGGACCTCCTCC
AATGGGCATGCCCCCTCGAGGGCCTCCGTTTGGATCTCCCATGGGTCACCCAGGTCCTATGCCTCCACATGGGATGCGTG
GGCCTCCTCCACTGATGCCTCCTCACGGGTACACTGGGCCTCCACGACCCCCACCCTACGGCTACCAGCGGGGCCCCCTG
CCTCCACCCAGACCCACCCCCCGGCCTCCAGTTCCCCCTCGTGGCCCACTTCGAGGCCCTCTTCCTCAGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 13 .04 RPM |
| SRP017611_kidney | 16 .49 RPM |
| SRP017611_brain | 17 .67 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000012495 | possible_ortholog | 2 retrogenes | |
| Mus musculus | ENSMUSG00000068856 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000006265 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_fcat_1607 | 70.03 | 86.05 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSFCAG00000010106 retrocopies