Parental gene: | RNF168, ENSFCAG00000022131 |
| Aliases: | None |
| Description: | ring finger protein 168, E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:26661] |
| Organism: | Cat (Felis catus) |
| Coordinates: | C2:71703928..71743350(-) |
>ENSFCAG00000022131
ATGGCTGTGACTCAAAACGCCATCCCTTCCTTGTCGGAATGTCAGTGCCGCATCTGTGTGGAAATCCTAATTGAGCCCAT
AACACTGCCTTGTAACCACACGCTCTGTAATCCCTGCTTCCAAGCGACTGTCGAAAAGGCAAGTTTATGCTGTCCTTTCT
GTCGCCGCCGGGTCTCTTCGTGGACCCGGTATCACACCCGAAGAAATTCTCTTGTCAACATGGAACTGTGGGAGATAATC
CAAAAACACTATCCAAAGGAATGCAAGCTTAGAGTCTCTGGGCAGGAATCAGAGGAGATCGTTGATGACTATCAGCCAGT
TCGCTTATTAAGTAAACCTGGGGAATTGAGAAGAGAATATGAAGAGGAGATAAGCAAGGTGGAAGCAGAGCGAAGAGCCA
GTGAGGAAGAAGAAAACAAAGCCAGCGAAGCATACATACAGAGATTATTGGCAGAGGAAGAAGAGGAGGAAAAACAACAG
GCAGAAAAGAGGCGAAGAGAGATGGAAGAACAACTGAAAAGTGATGAAGAACTAGCAAGAAAGCTAAGCATTAATATTAA
CAATTTCTGTGACGGAAGTGTCTTGACTTCTCCCTTGAATTCCAGAAAATCTGATACAGTCACAACCAAGTCTCAAAAGA
AGAGTAAGAACAAACAAACAAACACTGGAGATATTCAGAAGTATTTGTCACCTAAATCTCAATTTGGATCAGCATCGCAG
TGTGAAGTTGTACAAGAAAGCAAGGAAAACTCCATGTCCAAGGAAACTGACGGTAGTATTGTAAATAGCCCAACAAGGCA
AGATACAGAAATTGAAGAAGATATGCCAACACTTTCTCCGCAAATAGGCATGGATGTTCAAGAACAAGGTGCAAAGTCTT
CAGTAGAGTCACCTATGCCTCAGTTATATGCCAGTGGTAGAGAGTGGTGCCTTGAAGCAGAAGTCAAAATGAGACCAAGC
AATCATGATAAAGAGTTATGTGTCCTGAATCATGAGGGACCTGAAGCCAGAGTTCCATGCTCTGGAGAAACAGAGAGCGC
ATGCACTATATCAGGTATGACACAGATAATTGAAAGTAACACAGTTGAGACAGAAAATGAAGACTCTTGTCTCCTGACCA
GTAAAGATACTTCTAAAAGAAAAAACCAGGAATCTTCATTCGAAGCAGTCAGGGATCCCTGCATTTCTGCAAAAAGAAGG
AAAATGTTCCCCAGAGCTTCCTCAGACCAAGAGGAAACAGAAATCAACTTTACCCAAAAACTGATAGATTTGGAACGCTT
ACTTTTTGAGAGACATAAACAGGAAGAACAGGACAGGTTGTTAGCATTACAGCTTCAGAAACAAGTAGATAAAGAACAAA
TGAAGCCAAACCGGCAAAAAGGATCCCCAGATGAGTATCAGTTACGTCCTACATCTTCACCACCAGACAAGTTGCTAAAT
GGACAGAGGAAGAATTCCAAAGACAGGAACTTCAAAAGACAGACTGATATAGAGCATTCAGAATCTCGGAGAGGCTCAAA
AAATGAAAACTGGCAGCCATCTTTTAAGATCCAGTTGAAACATTCAGTTAATGTTAATGGGAGAAAGGTGCCAAATTCTT
CTAGAGATAATTGTAATGTATCTAAAAGTGCTCATTCCCTACAGCCTAGTAAGTCACAGAAAAGTATTTTCAGATGTTTC
AGAGGTATACGAAGT
ATGGCTGTGACTCAAAACGCCATCCCTTCCTTGTCGGAATGTCAGTGCCGCATCTGTGTGGAAATCCTAATTGAGCCCAT
AACACTGCCTTGTAACCACACGCTCTGTAATCCCTGCTTCCAAGCGACTGTCGAAAAGGCAAGTTTATGCTGTCCTTTCT
GTCGCCGCCGGGTCTCTTCGTGGACCCGGTATCACACCCGAAGAAATTCTCTTGTCAACATGGAACTGTGGGAGATAATC
CAAAAACACTATCCAAAGGAATGCAAGCTTAGAGTCTCTGGGCAGGAATCAGAGGAGATCGTTGATGACTATCAGCCAGT
TCGCTTATTAAGTAAACCTGGGGAATTGAGAAGAGAATATGAAGAGGAGATAAGCAAGGTGGAAGCAGAGCGAAGAGCCA
GTGAGGAAGAAGAAAACAAAGCCAGCGAAGCATACATACAGAGATTATTGGCAGAGGAAGAAGAGGAGGAAAAACAACAG
GCAGAAAAGAGGCGAAGAGAGATGGAAGAACAACTGAAAAGTGATGAAGAACTAGCAAGAAAGCTAAGCATTAATATTAA
CAATTTCTGTGACGGAAGTGTCTTGACTTCTCCCTTGAATTCCAGAAAATCTGATACAGTCACAACCAAGTCTCAAAAGA
AGAGTAAGAACAAACAAACAAACACTGGAGATATTCAGAAGTATTTGTCACCTAAATCTCAATTTGGATCAGCATCGCAG
TGTGAAGTTGTACAAGAAAGCAAGGAAAACTCCATGTCCAAGGAAACTGACGGTAGTATTGTAAATAGCCCAACAAGGCA
AGATACAGAAATTGAAGAAGATATGCCAACACTTTCTCCGCAAATAGGCATGGATGTTCAAGAACAAGGTGCAAAGTCTT
CAGTAGAGTCACCTATGCCTCAGTTATATGCCAGTGGTAGAGAGTGGTGCCTTGAAGCAGAAGTCAAAATGAGACCAAGC
AATCATGATAAAGAGTTATGTGTCCTGAATCATGAGGGACCTGAAGCCAGAGTTCCATGCTCTGGAGAAACAGAGAGCGC
ATGCACTATATCAGGTATGACACAGATAATTGAAAGTAACACAGTTGAGACAGAAAATGAAGACTCTTGTCTCCTGACCA
GTAAAGATACTTCTAAAAGAAAAAACCAGGAATCTTCATTCGAAGCAGTCAGGGATCCCTGCATTTCTGCAAAAAGAAGG
AAAATGTTCCCCAGAGCTTCCTCAGACCAAGAGGAAACAGAAATCAACTTTACCCAAAAACTGATAGATTTGGAACGCTT
ACTTTTTGAGAGACATAAACAGGAAGAACAGGACAGGTTGTTAGCATTACAGCTTCAGAAACAAGTAGATAAAGAACAAA
TGAAGCCAAACCGGCAAAAAGGATCCCCAGATGAGTATCAGTTACGTCCTACATCTTCACCACCAGACAAGTTGCTAAAT
GGACAGAGGAAGAATTCCAAAGACAGGAACTTCAAAAGACAGACTGATATAGAGCATTCAGAATCTCGGAGAGGCTCAAA
AAATGAAAACTGGCAGCCATCTTTTAAGATCCAGTTGAAACATTCAGTTAATGTTAATGGGAGAAAGGTGCCAAATTCTT
CTAGAGATAATTGTAATGTATCTAAAAGTGCTCATTCCCTACAGCCTAGTAAGTCACAGAAAAGTATTTTCAGATGTTTC
AGAGGTATACGAAGT
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 10 .51 RPM |
| SRP017611_kidney | 15 .87 RPM |
| SRP017611_brain | 35 .69 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000013317 | ortholog_one2many | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000010864 | ortholog_one2many | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000012066 | ortholog_one2many | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000021829 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_fcat_1967 | 72.97 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSFCAG00000022131 retrocopies