Parental gene:

HCCS, ENSFCAG00000022393

Aliases:None
Description:holocytochrome c synthase [Source:HGNC Symbol;Acc:4837]
Organism:Cat (Felis catus)
Coordinates:X:7699737..7710351(+)


>ENSFCAG00000022393
ATGGGTTTGTCTGCGTCTACCCCTGCTGTTGCAGTTCAGACCTCAAATGCTTCTGATCATCAGACAGCATCCCCGCCTTC
AGGATGCCCCATGCATGAAGGGAAAATGAAAGGCTGTCCAGTGAGTGCGGAGCCACCTGAGCCAACTTGTGAGAACAAAA
CGAGCTCTGTGCCCACCCACCAGGACCGTGCATATGAGTACGTGGAGTGCCCTGTCACCGGCGCCGTGGCCGGCAGTAAG
GAGGACCTGGACCCTTCTAACCTGATGCCGCCACCCAACCAGATGCCGGCCCCGGATCAGCCATTTGCGCTGTCTACGGT
GAGGGAGGAGTCATCCATTCCGAGAGCAGATTCAGACAAAAAGTGGGTTTATCCTTCTGAACAGATGTTCTGGAACGCGA
TGTTACGCAAAGGGTGGAAGTGGAAGGATGACGATATTAGTCAGAGAGATATGTACAATATCATCAAAATTCACAATCAG
AATAACGAGCAAGCCTGGAAGGAGATTTTGAAGTGGGAAGCCCTTCATGCTGCGGAGTGTCCTTGTGGTCCATCGTTGAT
CCGGTTCGGAGGTAAAGCGAAAGAGTACTCACCAAGGGCAAGAATCCGTTCCTGGATGGGGTACGAGTTGCCTTTTGACA
GGCACGACTGGATCATCAACCGCTGTGGGACAGAAGTCAGGTATGTCATCGACTACTACGACGGCGGCGAAGTTAACCAG
GACTACCAGTTCACCATCCTGGACGTCCGGCCCGCTTTGGATTCTTTTTCGGCGGTGTGGGACAGGATGAAGGTCGCGTG
GTGGCGCTGGACCTCGTAA

Library Parental gene expression (RPM)
SRP017611_brain 21 .92 RPM
SRP017611_kidney 19 .58 RPM
SRP017611_liver 10 .31 RPM



Species Parental gene accession Homology type Retrogenes number
Myotis lucifugus ENSMLUG00000003569 ortholog_one2one 1 retrogene
retro_mluc_1621,
Ictidomys tridecemlineatus ENSSTOG00000014037 ortholog_one2one 6 retrogenes
retro_itri_1277, retro_itri_1462, retro_itri_1594, retro_itri_1700, retro_itri_242, retro_itri_745,
Tupaia belangeri ENSTBEG00000002670 ortholog_one2one 1 retrogene
retro_tbel_1503,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_1706 66.55 99.26
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Download FASTA sequences of all ENSFCAG00000022393 retrocopies