Parental gene:

NIPA2, ENSFCAG00000023073

Aliases:None
Description:non imprinted in Prader-Willi/Angelman syndrome 2 [Source:HGNC Symbol;Acc:17044]
Organism:Cat (Felis catus)
Coordinates:JH408577.1:217055..235445(-)


>ENSFCAG00000023073
ATGATCCAGGGGCGTGGAAAATATGACTTTTACATTGGTTTGGGATTGGCTATGAGCTCCAGCATTTTCATTGGCGGGAG
TTTCATTTTGAAAAAAGGTCTTCTGCGCCTTGCCAGGAAAGGCTCCATGAGAGCAGGTCAAGGTGGCCATGCATATCTTA
AAGAATGGTTGTGGTGGGCTGGATTGCTATCAATGGGAGCAGGTGAGGTGGTCAACTTTGCTGCATATGCCTTTGCACCA
GCCACCCTAGTGACTCCGTTAGGAGCTCTCAGCGTCCTAGTAAGTGCCATTCTTTCTTCATACTTTCTAAATGAAAGACT
TAATCTTCATGGGAAAATTGGATGGTTGCTAAGTATTCTAGGATCTACAGTTATGGTCATTCATGCTCCAAAAGAAGAGG
AGATCGAGACTCTAAATGAAATGTCTCACAAGCTAGGAGATCCAGGTTTTGTGGTCTTTGCAACACTTGTGGTCATTGTG
TCATTGATCTTAATCTTCGTGGTGGGACCTCGCCATGGACGGACAAACATTCTTGTGTACATAACAATCTGCTCTGTAAT
TGGAGCATTTTCAGTCTCCTGTGTTAAGGGCCTGGGCATTGCTATCAAAGAGCTGTTTGCTGGAAAGCCTGTGCTGCGAC
ATCCCCTGGCCTGGATTCTGCTGCTGAGCCTTATAGTCTGTGTAAGCACACAGATTAATTACCTGAACAGGGCTCTGGAT
ATATTCAACACTTCCATTGTGACTCCAATATATTATGTATTCTTTACAGCATCAGTTTTAACTTGTTCAGCTATTCTTTT
TAAGGAGTGGCAAGATATGCCTGTTGATGATGTCATTGGTACTTTGAGTGGCTTCTTTACAATCATTGTGGGAATATTCT
TGTTGCATGCCTTTAAAGATGTCAGCTTTACTCTAGCAAGTCTCCCTGTGTCTTTTCGACAAGATGAAAAAGCAATGAAT
GGCAATCTGTCTAACATGTATGAAGTTCTTAGTAATAATGACGAAAACTTAACCTGTGGAATTGAACAACACAGTGGTGA
AAATGTCTCCCGAAGAAATGGAAATCTCACAGCTTTTTAA

Library Parental gene expression (RPM)
SRP017611_liver 26 .99 RPM
SRP017611_kidney 71 .32 RPM
SRP017611_brain 38 .68 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000013824 ortholog_one2one 1 retrogene
retro_amel_1163,
Choloepus hoffmanni ENSCHOG00000005553 ortholog_one2many 1 retrogene
retro_chof_9,
Callithrix jacchus ENSCJAG00000005448 ortholog_one2one 1 retrogene
retro_cjac_1506,
Equus caballus ENSECAG00000006379 ortholog_one2one 1 retrogene
retro_ecab_656,
Macaca mulatta ENSMMUG00000003892 ortholog_one2one 1 retrogene
retro_mmul_1510,
Mus musculus ENSMUSG00000030452 ortholog_one2one 1 retrogene
retro_mmus_3551,
Oryctolagus cuniculus ENSOCUG00000010746 ortholog_one2one 3 retrogenes
retro_ocun_1581, retro_ocun_773, retro_ocun_809,
Ictidomys tridecemlineatus ENSSTOG00000004003 ortholog_one2many 3 retrogenes
retro_itri_1847, retro_itri_347, retro_itri_388,
Vicugna pacos ENSVPAG00000000671 ortholog_one2one 1 retrogene
retro_vpac_285,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_246 76.82 64.35
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Download FASTA sequences of all ENSFCAG00000023073 retrocopies