Parental gene:

ENSSTOG00000004003

Aliases:None
Description:None
Organism:Squirrel (Ictidomys tridecemlineatus)
Coordinates:JH393281.1:38332751..38357070(-)


>ENSSTOG00000004003
ATGAGCCCAGGGCGTGGAAAATATGATTTCTATATTGGTTTGGGATTGGCTATGACCTCCAGCATTTTCATAGGAGGGAG
TTTCATTTTGAAAAAAAAAGGCCTTCTGCGACTTGCCAGAAAAGGATCCATGAGAGCAGGTCAAGGTGGCCATGCATATC
TTAAAGAATGGTTGTGGTGGGCTGGACTACTGTCAATGGGGGCAGGCGAGGTGGCCAACTTCGCTGCATATGCCTTTGCA
CCAGCCACGCTAGTGACTCCACTGGGAGCTCTCAGCGTCCTCGTAAGTGCCATTCTTTCTTCATACTTTCTAAATGAAAG
ACTTAATCTTCATGGGAAAATTGGATGTTTGCTAAGCATTCTAGGATCTACAGTTATGGTCATCCATGCTCCAAAGGAAG
AGGAGATTGAGACGTTAAATGAAATGTCACACAAGTTAGGTGATCCAGGTTTTGTGGTATTTGCAACAATTGTGGTCATT
GTGTCCTTGATATTAATCTTTGTGGTGGGACCTCGCCACGGACAGACAAATATTCTTGTGTACATAACAATCTGCTCTGT
GATTGGAGCGTTTTCAGTGTCCTGTGCAAAGGGCTTGGGCATCACCATCAAAGAACTGTTAGCTGGAAAGCCTGTGCTGC
GGCATCCCCTGGCCTGGATTCTGCTGCTGAGCCTCGTCATCTGTGTGAGCACACAGATCAATTACCTAAACCGGGCCCTG
GACATATTCAACACTTCCCTTGTAACACCAATATATTACGTTTTCTTTACAACCTCAGTTTTAACTTGTTCAGCTATTCT
TTTTAAGGAGTGGCAAGATATGCCTGCTGATGATATCATTGGGACTCTGAGTGGCTTCTTCACAATCATTGTGGGGATAT
TCTTGTTGCATGCCTTTAAAGATGTCAGCTTTAGTCTAGCAAGTCTGCCTGTGTCTTTTCGAAAAGATGATAAAGCAATG
AATGGCAATCTCCCTACTATGTATGAAGTTCTTAATAATAATGAAGAAAGCTTAACCTGTGGAATTGAACAACACACTGG
TGAGAATATCTCACGGAGAAATGGAAATCTGACAGGTTTTTAA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000013824 ortholog_one2many 1 retrogene
retro_amel_1163,
Choloepus hoffmanni ENSCHOG00000005553 ortholog_many2many 1 retrogene
retro_chof_9,
Callithrix jacchus ENSCJAG00000005448 ortholog_one2many 1 retrogene
retro_cjac_1506,
Equus caballus ENSECAG00000006379 ortholog_one2many 1 retrogene
retro_ecab_656,
Felis catus ENSFCAG00000023073 ortholog_one2many 1 retrogene
retro_fcat_246,
Macaca mulatta ENSMMUG00000003892 ortholog_one2many 1 retrogene
retro_mmul_1510,
Mus musculus ENSMUSG00000030452 ortholog_one2many 1 retrogene
retro_mmus_3551,
Oryctolagus cuniculus ENSOCUG00000010746 ortholog_one2many 3 retrogenes
retro_ocun_1581, retro_ocun_773, retro_ocun_809,
Vicugna pacos ENSVPAG00000000671 ortholog_one2many 1 retrogene
retro_vpac_285,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_itri_347 89.89 99.72
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2. retro_itri_388 92.75 91.11
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3. retro_itri_1847 90.00 85.83
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Download FASTA sequences of all ENSSTOG00000004003 retrocopies