Parental gene: | OBFC1, ENSG00000107960 |
| Aliases: | None |
| Description: | oligonucleotide/oligosaccharide-binding fold containing 1 [Source:HGNC Symbol;Acc:26200] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 10:105642299..105677963(-) |
>ENSG00000107960
ATGCAGCCTGGATCCAGCCGGTGTGAAGAGGAGACCCCTTCCCTCTTGTGGGGTTTGGATCCTGTGTTTCTAGCCTTTGC
AAAACTCTACATCAGGGATATCCTGGACATGAAGGAGTCCCGCCAGGTGCCAGGTGTATTTTTGTACAATGGACATCCAA
TAAAACAGGTAGATGTCTTGGGAACTGTCATTGGAGTGAGAGAAAGAGATGCTTTCTACAGTTATGGAGTGGATGACAGC
ACTGGAGTTATAAACTGCATCTGCTGGAAAAAGTTGAATACTGAGTCTGTATCAGCTGCTCCAAGTGCAGCAAGAGAGCT
CAGCTTAACCTCACAACTTAAGAAGCTACAAGAGACCATTGAGCAGAAAACAAAGATAGAGATCGGGGACACGATCCGAG
TCAGAGGCAGTATCCGCACATACAGAGAAGAGCGAGAGATTCATGCCACCACTTACTATAAAGTGGACGACCCAGTGTGG
AACATTCAAATTGCAAGGATGCTTGAGCTGCCCACTATCTACAGGAAAGTTTATGACCAGCCTTTTCACAGCTCAGCCCT
AGAGAAAGAAGAGGCACTAAGCAATCCAGGCGCCCTGGACCTCCCCAGTCTCACGAGTTTGCTGAGTGAAAAAGCCAAAG
AATTCCTCATGGAGAACAGAGTGCAGAGCTTTTACCAGCAGGAGCTGGAAATGGTGGAGTCTTTGCTGTCCCTTGCCAAT
CAGCCTGTGATTCACAGTGCCTCCTCCGACCAAGTGAATTTTAAGAAGGACACCACTTCCAAGGCAATTCATAGTATATT
TAAGAATGCTATACAACTGCTGCAGGAAAAAGGACTTGTTTTCCAGAAAGATGATGGTTTTGATAACCTATACTATGTAA
CCAGAGAAGACAAAGACCTGCACAGAAAGATCCACCGGATCATTCAGCAGGACTGCCAGAAACCAAATCACATGGAGAAG
GGCTGTCACTTCCTGCACATCTTGGCCTGTGCTCGCCTGAGCATCCGCCCGGGCCTGAGCGAGGCTGTGCTGCAGCAAGT
TCTGGAGCTCCTGGAGGACCAGAGTGACATTGTCAGCACAATGGAGCACTACTACACAGCGTTCTGA
ATGCAGCCTGGATCCAGCCGGTGTGAAGAGGAGACCCCTTCCCTCTTGTGGGGTTTGGATCCTGTGTTTCTAGCCTTTGC
AAAACTCTACATCAGGGATATCCTGGACATGAAGGAGTCCCGCCAGGTGCCAGGTGTATTTTTGTACAATGGACATCCAA
TAAAACAGGTAGATGTCTTGGGAACTGTCATTGGAGTGAGAGAAAGAGATGCTTTCTACAGTTATGGAGTGGATGACAGC
ACTGGAGTTATAAACTGCATCTGCTGGAAAAAGTTGAATACTGAGTCTGTATCAGCTGCTCCAAGTGCAGCAAGAGAGCT
CAGCTTAACCTCACAACTTAAGAAGCTACAAGAGACCATTGAGCAGAAAACAAAGATAGAGATCGGGGACACGATCCGAG
TCAGAGGCAGTATCCGCACATACAGAGAAGAGCGAGAGATTCATGCCACCACTTACTATAAAGTGGACGACCCAGTGTGG
AACATTCAAATTGCAAGGATGCTTGAGCTGCCCACTATCTACAGGAAAGTTTATGACCAGCCTTTTCACAGCTCAGCCCT
AGAGAAAGAAGAGGCACTAAGCAATCCAGGCGCCCTGGACCTCCCCAGTCTCACGAGTTTGCTGAGTGAAAAAGCCAAAG
AATTCCTCATGGAGAACAGAGTGCAGAGCTTTTACCAGCAGGAGCTGGAAATGGTGGAGTCTTTGCTGTCCCTTGCCAAT
CAGCCTGTGATTCACAGTGCCTCCTCCGACCAAGTGAATTTTAAGAAGGACACCACTTCCAAGGCAATTCATAGTATATT
TAAGAATGCTATACAACTGCTGCAGGAAAAAGGACTTGTTTTCCAGAAAGATGATGGTTTTGATAACCTATACTATGTAA
CCAGAGAAGACAAAGACCTGCACAGAAAGATCCACCGGATCATTCAGCAGGACTGCCAGAAACCAAATCACATGGAGAAG
GGCTGTCACTTCCTGCACATCTTGGCCTGTGCTCGCCTGAGCATCCGCCCGGGCCTGAGCGAGGCTGTGCTGCAGCAAGT
TCTGGAGCTCCTGGAGGACCAGAGTGACATTGTCAGCACAATGGAGCACTACTACACAGCGTTCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 7 .39 RPM |
| bodymap2_lung | 36 .57 RPM |
| bodymap2_breast | 14 .77 RPM |
| bodymap2_adipose | 17 .11 RPM |
| bodymap2_adrenal | 19 .24 RPM |
| bodymap2_skeletal_muscle | 12 .40 RPM |
| bodymap2_thyroid | 12 .71 RPM |
| bodymap2_prostate | 19 .92 RPM |
| bodymap2_colon | 10 .05 RPM |
| bodymap2_testis | 22 .02 RPM |
| bodymap2_brain | 9 .52 RPM |
| bodymap2_heart | 16 .97 RPM |
| bodymap2_white_blood_cells | 26 .17 RPM |
| bodymap2_lymph_node | 15 .79 RPM |
| bodymap2_ovary | 10 .31 RPM |
| bodymap2_kidney | 15 .92 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000018342 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000008979 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000015323 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000015282 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000002628 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000002919 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_3257 | 72.66 | 77.72 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000107960 retrocopies