Parental gene: | OBFC1, ENSPTRG00000002919 |
| Aliases: | None |
| Description: | None |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 10:103125347..103160838(-) |
>ENSPTRG00000002919
ATGCAGCCTGGATCCAGCCGGTGTGAAGAGGAGACCCCTTCCCTCTTGTGGGGTTTGGATCCTGTGTTTCTAGCCTTTGC
AAAACTCTACATCAGGGATATCCTGGACATGAAGGAGTCCCGCCAGGTGCCAGGTGTATTTTTGTACAATGGACATCCAA
TAAAACAGGTAGATGTCTTGGGAACTGTCATTGGAGTGAGAGAAAGAGATGCTTTCTACAGTTATGGAGTGGATGACAGC
ACTGGAGTTATAAACTGCATCTGCTGGAAAAAGTTGAATACTGAGTCTGTATCAGCTGCTCCAAGTGCAGCAAGAGAGCT
CAGCTTAACCTCACAACTTAAGAAGCTACAAGAGACCATTGAGCAGAGAACAAAGATAGAGATCGGGGACACGATCCGAG
TCAGAGGCAGTATCCGCACATACAGAGAAGAGCGAGAGATTCATGCCACCGCTTACTATAAAGTGGACGACCCAGTGTGG
AACATTCAAATTGCAAGGATGCTTGAGCTGCCCACTATCTACAGGAAAGTTTATGACCAGCCTTTTCACAGCTCAGCCCT
AGAGAAAGAAGAGGCACTAAGCAATCCAGGCGCCCTGGACCTCCCCAGTCTCACGAGTTTGCTGAGTGAAAAAGCCAAAG
AATTCCTCATGGAGAACAGAGTGCAGAGCTTTTACCAGCAGGAGCTGGAAATGGTGGAGTCTTTGCTGTCCCTTGCCAAT
CAGCCTGTGATTCACAGTGCATGCTCCGACCAAGTGAATTTTAAGAAGGACACCACTTCCAAGGCAATTCATAGTATATT
TAAGAATGCTATACAACTGCTGCAGGAAAAAGGACTTGTTTTCCAGAAAGATGATGGTTTTGATAACCTGTACTATGTAA
CCAGAGAAGACAAAGACCTGCACAGAAAGATCCACCGGATCATTCAGCAGGACTGCCAGAAACCAAATCACATGGAGAAG
GGCTGTCACTTCCTGCACATCTTGGCCTGTGCTCGCCTGAGCATCCGCCCGGGCCTGAGCGAGGCTGTGCTGCAGCAAGT
TCTGGAGCTCCTGGAGGACCAGAGTGACATTGTCAGCACAATGGAGCACTACTACACAGCGTTCTGA
ATGCAGCCTGGATCCAGCCGGTGTGAAGAGGAGACCCCTTCCCTCTTGTGGGGTTTGGATCCTGTGTTTCTAGCCTTTGC
AAAACTCTACATCAGGGATATCCTGGACATGAAGGAGTCCCGCCAGGTGCCAGGTGTATTTTTGTACAATGGACATCCAA
TAAAACAGGTAGATGTCTTGGGAACTGTCATTGGAGTGAGAGAAAGAGATGCTTTCTACAGTTATGGAGTGGATGACAGC
ACTGGAGTTATAAACTGCATCTGCTGGAAAAAGTTGAATACTGAGTCTGTATCAGCTGCTCCAAGTGCAGCAAGAGAGCT
CAGCTTAACCTCACAACTTAAGAAGCTACAAGAGACCATTGAGCAGAGAACAAAGATAGAGATCGGGGACACGATCCGAG
TCAGAGGCAGTATCCGCACATACAGAGAAGAGCGAGAGATTCATGCCACCGCTTACTATAAAGTGGACGACCCAGTGTGG
AACATTCAAATTGCAAGGATGCTTGAGCTGCCCACTATCTACAGGAAAGTTTATGACCAGCCTTTTCACAGCTCAGCCCT
AGAGAAAGAAGAGGCACTAAGCAATCCAGGCGCCCTGGACCTCCCCAGTCTCACGAGTTTGCTGAGTGAAAAAGCCAAAG
AATTCCTCATGGAGAACAGAGTGCAGAGCTTTTACCAGCAGGAGCTGGAAATGGTGGAGTCTTTGCTGTCCCTTGCCAAT
CAGCCTGTGATTCACAGTGCATGCTCCGACCAAGTGAATTTTAAGAAGGACACCACTTCCAAGGCAATTCATAGTATATT
TAAGAATGCTATACAACTGCTGCAGGAAAAAGGACTTGTTTTCCAGAAAGATGATGGTTTTGATAACCTGTACTATGTAA
CCAGAGAAGACAAAGACCTGCACAGAAAGATCCACCGGATCATTCAGCAGGACTGCCAGAAACCAAATCACATGGAGAAG
GGCTGTCACTTCCTGCACATCTTGGCCTGTGCTCGCCTGAGCATCCGCCCGGGCCTGAGCGAGGCTGTGCTGCAGCAAGT
TCTGGAGCTCCTGGAGGACCAGAGTGACATTGTCAGCACAATGGAGCACTACTACACAGCGTTCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 5 .56 RPM |
| SRP007412_cerebellum | 6 .13 RPM |
| SRP007412_heart | 13 .03 RPM |
| SRP007412_kidney | 16 .89 RPM |
| SRP007412_liver | 7 .23 RPM |
| SRP007412_testis | 35 .83 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000018342 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000107960 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000008979 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000015323 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000015282 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000002628 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_2203 | 73.01 | 77.72 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000002919 retrocopies