Parental gene: | OBFC1, ENSPPYG00000002628 |
| Aliases: | None |
| Description: | oligonucleotide/oligosaccharide-binding fold containing 1 [Source:HGNC Symbol;Acc:26200] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 10:102969064..103005495(-) |
>ENSPPYG00000002628
ATGCAGCCTGGATCCAGCCGGTGTGAAGAGGAGACCCCTTCCCTCTTGTGGGGTTTGGATCCTGTGTTTCTAGCCTTTGC
AAAACTCTACATCAGGGATATCCTGGACATGAAGGAGTCCCGCCAGGTGCCAGGTGTATTTTTGTACAATGGACATCCAA
TAAAACAGGTAGATGTCTTGGGAACTGTCATTGGAGTGAGAGAAAGAGATGCTTTCTACAGTTATGGAGTGGATGACAGC
ACTGGAGTTATAAACTGCATCTGCTGGAAAAAGTTGAATACTGAGTCTGTATCAGCTGCTCCAAGTGCAGCAAGAGAGCT
CAGCTTAACCTCACAACTTAAGAAGCTACAAGAGACCATTGAGCAGAGAACAAAGATAGAGATTGGGGACACGATCCGAG
TCAGAGGCAGTATCCGCACATACAGAGAAGAGCGAGAGATTCATGCCGCCGCTTACTATAAAGTGGACGACCCAGTGTGG
AACATTCAAATTGCAAGGATGCTTGAGCTGCCCACTATCTACAGGAAAGTTTATGACCAGCCTTTTCGCAGCTCAGCCCT
AGAGAAAGAAGAGGCACTAAGCAATCCAGGCGCCCTGGACCTCCCCAATCTCACGAGTTTGCTGAGTGAAAAAGCCAAAG
AATTCCTCATGGAGAACAGAGTGCAGAGCTTTTACCAGCAGGAGCTGGAAATGGTGGAGTCTTTGCTGTCCCTTGCCAAT
CAGCCTGTGATTCACAGTGCCTGCTCCGACCAAGTGAATTTTAAGAAGGACACCACTTCCAAGGCAATTCATAGTATATT
TAAGAATGCTATACAACTGCTGCTGGAAAAAGGACTTGTTTTCCAGAAAGATGATGGTTTCGATAACCTATACTATGTAA
CCAGAGAAGACAAAGACCTGCACAGAAAGATCCACCGGATCATTCAGCAGGACTGCCAGAAACCAAATCACATGGAGAAG
GGCTGTCACTTCCTGCACATCTTGGCCTGCGCTCGCCTGAGCATCCGCCCGGGCCTGAGCGAGGCTGTGCTGCAGCAAGT
TCTGGAGCTCCTGGAGGACCAGAGTGACATTGTCAGCACAATGGAGCACTACTACACAGCGTTCTGA
ATGCAGCCTGGATCCAGCCGGTGTGAAGAGGAGACCCCTTCCCTCTTGTGGGGTTTGGATCCTGTGTTTCTAGCCTTTGC
AAAACTCTACATCAGGGATATCCTGGACATGAAGGAGTCCCGCCAGGTGCCAGGTGTATTTTTGTACAATGGACATCCAA
TAAAACAGGTAGATGTCTTGGGAACTGTCATTGGAGTGAGAGAAAGAGATGCTTTCTACAGTTATGGAGTGGATGACAGC
ACTGGAGTTATAAACTGCATCTGCTGGAAAAAGTTGAATACTGAGTCTGTATCAGCTGCTCCAAGTGCAGCAAGAGAGCT
CAGCTTAACCTCACAACTTAAGAAGCTACAAGAGACCATTGAGCAGAGAACAAAGATAGAGATTGGGGACACGATCCGAG
TCAGAGGCAGTATCCGCACATACAGAGAAGAGCGAGAGATTCATGCCGCCGCTTACTATAAAGTGGACGACCCAGTGTGG
AACATTCAAATTGCAAGGATGCTTGAGCTGCCCACTATCTACAGGAAAGTTTATGACCAGCCTTTTCGCAGCTCAGCCCT
AGAGAAAGAAGAGGCACTAAGCAATCCAGGCGCCCTGGACCTCCCCAATCTCACGAGTTTGCTGAGTGAAAAAGCCAAAG
AATTCCTCATGGAGAACAGAGTGCAGAGCTTTTACCAGCAGGAGCTGGAAATGGTGGAGTCTTTGCTGTCCCTTGCCAAT
CAGCCTGTGATTCACAGTGCCTGCTCCGACCAAGTGAATTTTAAGAAGGACACCACTTCCAAGGCAATTCATAGTATATT
TAAGAATGCTATACAACTGCTGCTGGAAAAAGGACTTGTTTTCCAGAAAGATGATGGTTTCGATAACCTATACTATGTAA
CCAGAGAAGACAAAGACCTGCACAGAAAGATCCACCGGATCATTCAGCAGGACTGCCAGAAACCAAATCACATGGAGAAG
GGCTGTCACTTCCTGCACATCTTGGCCTGCGCTCGCCTGAGCATCCGCCCGGGCCTGAGCGAGGCTGTGCTGCAGCAAGT
TCTGGAGCTCCTGGAGGACCAGAGTGACATTGTCAGCACAATGGAGCACTACTACACAGCGTTCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 3 .37 RPM |
| SRP007412_cerebellum | 5 .11 RPM |
| SRP007412_heart | 2 .92 RPM |
| SRP007412_kidney | 6 .23 RPM |
| SRP007412_liver | 2 .85 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000018342 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000107960 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000008979 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000015323 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000015282 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000002919 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_2701 | 71.97 | 77.72 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000002628 retrocopies