Parental gene: | RTN4IP1, ENSG00000130347 |
| Aliases: | None |
| Description: | reticulon 4 interacting protein 1 [Source:HGNC Symbol;Acc:18647] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 6:107018902..107077373(-) |
>ENSG00000130347
ATGGAATTTCTGAAGACTTGTGTACTTAGAAGAAATGCATGCACTGCGGTTTGCTTCTGGAGAAGCAAAGTTGTCCAAAA
GCCTTCAGTTAGAAGGATTAGTACTACCTCTCCTAGGAGCACTGTCATGCCTGCTTGGGTGATAGATAAATATGGGAAGA
ATGAAGTGCTTCGATTCACTCAGAACATGATGATGCCTATCATACACTATCCAAATGAAGTCATTGTCAAAGTTCACGCT
GCCAGTGTAAATCCTATAGACGTTAATATGAGAAGTGGTTATGGAGCTACAGCTTTAAATATGAAGCGTGATCCTTTACA
CGTGAAAATCAAAGGAGAAGAATTTCCTCTGACTCTGGGTCGGGATGTCTCTGGCGTGGTGATGGAATGTGGGCTTGATG
TGAAATACTTCAAGCCTGGAGATGAGGTCTGGGCTGCAGTTCCTCCTTGGAAACAAGGCACTCTTTCAGAGTTTGTTGTA
GTCAGTGGGAATGAGGTCTCTCACAAACCCAAATCACTCACTCATACTCAAGCTGCCTCTTTGCCATATGTGGCTCTCAC
AGCCTGGTCTGCTATAAACAAAGTTGGTGGCCTGAATGACAAGAATTGCACAGGAAAACGTGTTCTAATCTTAGGCGCTT
CAGGCGGAGTTGGTACTTTTGCTATACAGGTAATGAAAGCATGGGATGCTCATGTGACAGCAGTTTGCTCCCAAGATGCC
AGTGAACTTGTAAGGAAGCTTGGTGCAGACGATGTAATTGATTACAAATCTGGAAGTGTGGAAGAGCAGTTGAAATCCTT
AAAACCATTTGATTTTATCCTTGATAATGTTGGCGGATCCACTGAAACATGGGCTCCAGATTTTCTCAAGAAATGGTCAG
GAGCCACCTATGTGACTTTGGTGACTCCTTTCCTCCTGAACATGGACCGATTGGGCATAGCAGATGGCATGTTGCAGACA
GGAGTCACTGTAGGTTCAAAGGCATTAAAGCATTTCTGGAAAGGAGTCCATTATCGCTGGGCATTTTTCATGGCCAGTGG
CCCATGTTTAGATGACATTGCAGAACTGGTGGATGCGGGAAAGATCCGGCCAGTTATTGAACAAACCTTTCCTTTTTCTA
AAGTTCCAGAAGCCTTCCTGAAGGTGGAAAGAGGACACGCACGAGGAAAGACTGTAATTAATGTTGTTTAA
ATGGAATTTCTGAAGACTTGTGTACTTAGAAGAAATGCATGCACTGCGGTTTGCTTCTGGAGAAGCAAAGTTGTCCAAAA
GCCTTCAGTTAGAAGGATTAGTACTACCTCTCCTAGGAGCACTGTCATGCCTGCTTGGGTGATAGATAAATATGGGAAGA
ATGAAGTGCTTCGATTCACTCAGAACATGATGATGCCTATCATACACTATCCAAATGAAGTCATTGTCAAAGTTCACGCT
GCCAGTGTAAATCCTATAGACGTTAATATGAGAAGTGGTTATGGAGCTACAGCTTTAAATATGAAGCGTGATCCTTTACA
CGTGAAAATCAAAGGAGAAGAATTTCCTCTGACTCTGGGTCGGGATGTCTCTGGCGTGGTGATGGAATGTGGGCTTGATG
TGAAATACTTCAAGCCTGGAGATGAGGTCTGGGCTGCAGTTCCTCCTTGGAAACAAGGCACTCTTTCAGAGTTTGTTGTA
GTCAGTGGGAATGAGGTCTCTCACAAACCCAAATCACTCACTCATACTCAAGCTGCCTCTTTGCCATATGTGGCTCTCAC
AGCCTGGTCTGCTATAAACAAAGTTGGTGGCCTGAATGACAAGAATTGCACAGGAAAACGTGTTCTAATCTTAGGCGCTT
CAGGCGGAGTTGGTACTTTTGCTATACAGGTAATGAAAGCATGGGATGCTCATGTGACAGCAGTTTGCTCCCAAGATGCC
AGTGAACTTGTAAGGAAGCTTGGTGCAGACGATGTAATTGATTACAAATCTGGAAGTGTGGAAGAGCAGTTGAAATCCTT
AAAACCATTTGATTTTATCCTTGATAATGTTGGCGGATCCACTGAAACATGGGCTCCAGATTTTCTCAAGAAATGGTCAG
GAGCCACCTATGTGACTTTGGTGACTCCTTTCCTCCTGAACATGGACCGATTGGGCATAGCAGATGGCATGTTGCAGACA
GGAGTCACTGTAGGTTCAAAGGCATTAAAGCATTTCTGGAAAGGAGTCCATTATCGCTGGGCATTTTTCATGGCCAGTGG
CCCATGTTTAGATGACATTGCAGAACTGGTGGATGCGGGAAAGATCCGGCCAGTTATTGAACAAACCTTTCCTTTTTCTA
AAGTTCCAGAAGCCTTCCTGAAGGTGGAAAGAGGACACGCACGAGGAAAGACTGTAATTAATGTTGTTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 7 .99 RPM |
| bodymap2_lung | 1 .74 RPM |
| bodymap2_breast | 6 .54 RPM |
| bodymap2_adipose | 2 .60 RPM |
| bodymap2_adrenal | 7 .72 RPM |
| bodymap2_skeletal_muscle | 2 .98 RPM |
| bodymap2_thyroid | 10 .96 RPM |
| bodymap2_prostate | 4 .50 RPM |
| bodymap2_colon | 2 .90 RPM |
| bodymap2_testis | 12 .20 RPM |
| bodymap2_brain | 9 .19 RPM |
| bodymap2_heart | 12 .66 RPM |
| bodymap2_white_blood_cells | 6 .67 RPM |
| bodymap2_lymph_node | 3 .23 RPM |
| bodymap2_ovary | 4 .51 RPM |
| bodymap2_kidney | 10 .86 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Gorilla gorilla | ENSGGOG00000008254 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000013349 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000012703 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000016882 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000018461 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_1030 | 88.69 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000130347 retrocopies