Parental gene: | RTN4IP1, ENSPTRG00000018461 |
| Aliases: | None |
| Description: | None |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 6:107614405..107671617(-) |
>ENSPTRG00000018461
ATGGAATTTCTGAAGACTTGTGTACTTAGAAGAAATGCATGCACTGCGGTTTGCTTCTGGAGAAGCAAAGTTGTCCAAAA
GCCTTCAGTTAGAAGGATTAGTACTACCTCTCCAAGGAGCACTGTCATGCCTGCTTGGGTGATAGATAAATATGGGAAGA
ATGAAGTGCTTCGATTCACTCAGAACATGATGATGCCTATCATACACTATCCAAATGAAGTCATTGTCAAAGTTCACGCT
GCCAGTGTAAATCCTATAGACGTTAATATGAGAAGTGGTTATGGAGCTACAGCTTTAAATATGAAGCGTGATCCTTTACA
CATGAAAATCAAAGGAGAAGAATTTCCTCTGACTCTGGGTCGGGATGTCTCTGGCGTGGTGATGGAATGTGGGCTTGATG
TGAAATACTTCAAGCCTGGAGATGAGGTCTGGGCTGCAGTTCCTCCTTGGAAACAAGGCACTCTTTCAGAGTTTGTTGTA
GTCAGTGGGAATGAGGTCTCTCACAAACCCAAATCACTCACTCATACTCAAGCTGCCTCTTTGCCATATGTGGCTCTCAC
AGCCTGGTCTGCTATAAACAAAGTTGGTGGCCTGAATGACAAGAATTGCACAGGAAAACGTGTTCTAATCTTAGGCGCTT
CAGGTGGAGTTGGTACTTTTGCTGTACAGGTAATGAAAGCATGGGATGCTCATGTGACAGCAGTTTGCTCCCAAGATGCC
AGTGAACTTGTAAGGAAGCTTGGTGCAGACGATGTAATTGATTACAAATCTGGAAGTGTGGAAGAGCAGTTGAAATGCTT
AAAACCGTTTGATTTTATCCTTGATAATGTTGGTGGATCCACTGAAACATGGGCTCCAGATTTTCTCAAGAAATGGTCAG
GAGCCACCTATGTGACTTTGGTGACTCCTTTCCTCCTGAACATGGACCGATTGGGCATAGCAGATGGCATGTTGCAGACA
GGAGTCACTGTAGGTTCAAAGGCATTAAAGCATTTCTGGAAAGGAGTCCATTATCGCTGGGCATTTTTCATGGCCAGTGG
CCCATGTTTAGATGACATTGCAGAACTGGTGGATGCGGGAAAGATCCGGCCAGTTATTGAACAAACCTTTCCTTTTTCTA
AAGTTCCAGAAGCCTTCCTGAAGGTGGAAAGAGGACACGCACGAGGAAAGACTGTAATTAACGTTGTTTAA
ATGGAATTTCTGAAGACTTGTGTACTTAGAAGAAATGCATGCACTGCGGTTTGCTTCTGGAGAAGCAAAGTTGTCCAAAA
GCCTTCAGTTAGAAGGATTAGTACTACCTCTCCAAGGAGCACTGTCATGCCTGCTTGGGTGATAGATAAATATGGGAAGA
ATGAAGTGCTTCGATTCACTCAGAACATGATGATGCCTATCATACACTATCCAAATGAAGTCATTGTCAAAGTTCACGCT
GCCAGTGTAAATCCTATAGACGTTAATATGAGAAGTGGTTATGGAGCTACAGCTTTAAATATGAAGCGTGATCCTTTACA
CATGAAAATCAAAGGAGAAGAATTTCCTCTGACTCTGGGTCGGGATGTCTCTGGCGTGGTGATGGAATGTGGGCTTGATG
TGAAATACTTCAAGCCTGGAGATGAGGTCTGGGCTGCAGTTCCTCCTTGGAAACAAGGCACTCTTTCAGAGTTTGTTGTA
GTCAGTGGGAATGAGGTCTCTCACAAACCCAAATCACTCACTCATACTCAAGCTGCCTCTTTGCCATATGTGGCTCTCAC
AGCCTGGTCTGCTATAAACAAAGTTGGTGGCCTGAATGACAAGAATTGCACAGGAAAACGTGTTCTAATCTTAGGCGCTT
CAGGTGGAGTTGGTACTTTTGCTGTACAGGTAATGAAAGCATGGGATGCTCATGTGACAGCAGTTTGCTCCCAAGATGCC
AGTGAACTTGTAAGGAAGCTTGGTGCAGACGATGTAATTGATTACAAATCTGGAAGTGTGGAAGAGCAGTTGAAATGCTT
AAAACCGTTTGATTTTATCCTTGATAATGTTGGTGGATCCACTGAAACATGGGCTCCAGATTTTCTCAAGAAATGGTCAG
GAGCCACCTATGTGACTTTGGTGACTCCTTTCCTCCTGAACATGGACCGATTGGGCATAGCAGATGGCATGTTGCAGACA
GGAGTCACTGTAGGTTCAAAGGCATTAAAGCATTTCTGGAAAGGAGTCCATTATCGCTGGGCATTTTTCATGGCCAGTGG
CCCATGTTTAGATGACATTGCAGAACTGGTGGATGCGGGAAAGATCCGGCCAGTTATTGAACAAACCTTTCCTTTTTCTA
AAGTTCCAGAAGCCTTCCTGAAGGTGGAAAGAGGACACGCACGAGGAAAGACTGTAATTAACGTTGTTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 5 .92 RPM |
| SRP007412_cerebellum | 8 .14 RPM |
| SRP007412_heart | 7 .08 RPM |
| SRP007412_kidney | 7 .51 RPM |
| SRP007412_liver | 3 .18 RPM |
| SRP007412_testis | 8 .96 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000130347 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000008254 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000013349 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000012703 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000016882 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_705 | 89.91 | 87.12 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000018461 retrocopies