Parental gene:

TJAP1, ENSG00000137221

Aliases:TJAP1, PILT, TJP4
Description:tight junction associated protein 1 (peripheral) [Source:HGNC Symbol;Acc:17949]
Organism:Human (Homo sapiens)
Coordinates:6:43445260..43474294(+)


>ENSG00000137221
ATGACTAGTGCCGCCCCTGCTAAGAAACCCTACCGTAAGGCACCACCAGAGCATCGGGAGCTGCGTTTGGAAATTCCTGG
ATCCCGGCTTGAGCAGGAGGAACCCCTGACTGATGCAGAAAGGATGAAGCTCTTACAGGAGGAGAATGAAGAGCTTCGCC
GGCGCCTGGCCTCCGCCACCAGACGCACTGAGGCCCTGGAACGTGAGCTGGAAATTGGGCAGGACTGCCTGGAGCTGGAG
CTGGGCCAGAGCCGCGAGGAGCTGGACAAATTTAAGGATAAGTTCCGCAGGCTGCAGAACAGCTACACGGCTTCCCAGCG
GACCAACCAGGAGTTGGAGGACAAGCTGCACACACTGGCCTCTCTTAGCCACAGCTGGATTTTTGCAATCAAGAAGGCTG
AGATGGATAGGAAGACGCTGGACTGGGAGATTGTGGAGCTGACCAACAAGCTGCTGGATGCCAAGAACACCATCAACAAG
CTGGAAGAGCTCAATGAGCGGTACCGGCTGGACTGCAACCTGGCTGTACAGCTCCTCAAGTGCAACAAGTCCCACTTCCG
AAACCACAAGTTTGCCGATCTGCCCTGTGAGCTACAGGACATGGTTCGGAAACATTTGCACAGTGGTCAAGAGGCCGCCA
GCCCAGGTCCTGCTCCCAGCCTAGCCCCAGGGGCTGTGGTGCCTACCTCAGTCATTGCCCGAGTGTTAGAGAAGCCGGAG
TCTCTACTGCTCAATTCAGCCCAGTCAGGCAGCGCCGGGCGCCCCTTGGCTGAGGATGTCTTTGTGCATGTGGACATGAG
TGAGGGTGTCCCAGGTGATCCAGCCAGTCCCCCGGCCCCTGGCAGCCCCACCCCACAACCCAATGGGGAGTGCCACTCTC
TGGGTACTGCCAGGGGCTCCCCGGAGGAAGAGCTGCCCCTGCCAGCCTTTGAGAAGCTGAACCCCTACCCAACCCCGTCT
CCACCACACCCACTGTATCCTGGCCGCAGGGTAATAGAGTTCTCTGAGGATAAGGTTCGGATCCCCCGCAACAGCCCCCT
GCCCAACTGCACTTACGCTACCCGCCAGGCCATTTCCCTGAGCCTGGTAGAGGAGGGGAGTGAGCGGGCCCGCCCCAGCC
CAGTGCCCAGCACCCCTGCCTCAGCCCAGGCCTCACCCCACCACCAGCCCAGCCCAGCACCCCTAACACTCAGTGCCCCA
GCTAGCTCTGCCAGCTCTGAAGAGGACCTGCTGGTCAGCTGGCAGCGGGCATTTGTGGACCGTACTCCACCACCTGCTGC
TGTGGCCCAGCGCACAGCCTTTGGACGCGATGCCCTCCCTGAGCTGCAGCGCCATTTTGCCCATAGCCCCGCTGACAGAG
ATGAGGTGGTCCAGGCACCTTCTGCCCGACCCGAAGAGAGTGAGCTTTTGCTACCCACAGAACCTGACTCTGGCTTTCCC
AGGGAGGAAGAAGAGCTGAACCTGCCTATCAGTCCTGAGGAAGAGCGCCAGAGCCTGCTGCCCATTAACAGGGGCACAGA
GGAGGGGCCAGGCACTTCCCACACCGAGGGCAGGGCCTGGCCACTCCCCAGCTCCAGTCGCCCCCAGCGCAGCCCCAAGA
GGATGGGGGTTCACCACCTGCACCGCAAGGACAGCCTGACCCAGGCCCAGGAGCAGGGCAACCTGCTCAACTAG

Library Parental gene expression (RPM)
bodymap2_liver 6 .65 RPM
bodymap2_lung 14 .98 RPM
bodymap2_breast 15 .56 RPM
bodymap2_adipose 14 .93 RPM
bodymap2_adrenal 27 .86 RPM
bodymap2_skeletal_muscle 35 .68 RPM
bodymap2_thyroid 22 .39 RPM
bodymap2_prostate 27 .16 RPM
bodymap2_colon 11 .50 RPM
bodymap2_testis 18 .63 RPM
bodymap2_brain 18 .61 RPM
bodymap2_heart 8 .88 RPM
bodymap2_white_blood_cells 16 .03 RPM
bodymap2_lymph_node 26 .46 RPM
bodymap2_ovary 25 .54 RPM
bodymap2_kidney 15 .35 RPM



Species Parental gene accession Homology type Retrogenes number
Gorilla gorilla ENSGGOG00000015185 ortholog_one2one 1 retrogene
retro_ggor_3059,
Pongo abelii ENSPPYG00000016642 ortholog_one2one 1 retrogene
retro_pabe_3811,
Pan troglodytes ENSPTRG00000018199 ortholog_one2one 1 retrogene
retro_ptro_3267,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_4899 80.11 99.82
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Download FASTA sequences of all ENSG00000137221 retrocopies