Parental gene: | TJAP1, ENSPTRG00000018199 |
| Aliases: | None |
| Description: | None |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 6:44107307..44136333(+) |
>ENSPTRG00000018199
ATGACTAGTGCCGCCCCTGCTAAGAAACCCTACCGTAAGGCACCACCAGAGCATCGGGAGCTGCGTTTGGAAATTCCTGG
ATCCCGGCTTGAGCAGGAGGAACCCCTGACTGATGCAGAAAGGATGAAGCTCTTACAGCAGGAGAATGAAGAGCTTCGCC
GGCGCCTGGCCTCCGCCACCAGACGCACTGAGGCCCTGGAACGTGAGCTGGAAATTGGGCAGGACTGCCTGGAGCTGGAG
CTGGGCCAGAGCCGCGAGGAGCTGGACAAATTTAAGGATAAGTTCCGCAGGCTGCAGAACAGCTACACGGCTTCCCAGCG
GACCAACCAGGAGTTGGAGGACAAGCTGCACACACTGATCAAGAAGGCTGAGATGGATAGGAAGACGCTGGACTGGGAGA
TTGTGGAGCTGACCAACAAGCTGTTGGATGCCAAGAACACCATCAACAAGCTGGAAGAGCTCAATGAGCGGTACCGGCTG
GACTGCAACCTGGCTGTACAGCTCCTCAAGTGCAACAAGTCCCACTTCCGAAACCACAAGTTTGCCGATCTGCCCTGTGA
GCTACAGGACATGGTTCGGAAACATTTGCACAGTGGTCAAGAGGCCGCCAGCCCAGGTCCTGCTCCCAGCCTAGCCCCAG
GGGCTGTGGTGCCTACCTCAGTCATTGCCCGAGTGTTAGAGAAGCCAGAGTCTCTACTGCTCAATTCAGCCCAGTCAGGC
AGCGCCGGGCGCCCCTTGGCTGAGGATGTCTTTGTGCATGTGGACATGAGTGAGGGTGTCCCAGGTGATCCAGCCAGTCC
CCCGGCCCCTGGCAGCCCCACCCCACAACCCAATGGGGAGTGCCACTCTCTGGGTACTGCCAGGGGCTCCCCGGAGGAAG
AGCTGCCCTTGCCAGCCTTTGAGAAGCTGAACCCCTACCCAACCCCATCTCCACCACACCCACTGTATCCTGGCCGCAGG
GTAATAGAGTTCTCTGAGGATAAGGTTCAGATCCCCCGCAACAGCCCCCTGCCCAACTGCACTTACGCTACCCGCCAGGC
CATTTCCCTGAGCCTGGTAGAGGAGGGGAGTGAGCGGGCCCGCCCCAGCCCAGTGCCCAGCACCCCTGCCTCAGCCCAGG
CCTCACCCCACCACCAGCCCAGCCCAGCGCCCCTAACACTCAGTGCCCCAGCTAGCTCTGCCAGCTCTGAAGAGGACCTG
CTGGTCAGCTGGCAGCGGGCATTTGTGGACCGTACTCCACCACCTGCTGCTGTGGCCCAGCGCACAGCCTTTGGACGCGA
TGCCCTCCCTGAGCTGCAGCGCCATTTTGCCCATAGCCCCGCTGACAGAGATGAGGTGGTCCAGGCACCTTCTGCCCGAC
CCGAAGAGAGTGAGCTTTTGCTACCCACAGAACCTGACTCTGGCTTTCCCAGGGAGGAAGAAGAGCTGAACCTGCCTATC
AGTCCTGAGGAAGAGCGCCAGAGCCTGCTGCCCATTAACAGTGGCACAGAGGAGGGGCCAGGCACTTCCCACACCGAGGG
CAGGGCCTGGCCACTCCCCAGCTCCAGTCGTCCCCAGCGCAGCCCCAAGAGGATGGGGGTTCACCACCTGCACCGCAAGG
ACAGCCTGACCCAGGCCCAGGAGCAGGGCAACCTGCTCAACTAG
ATGACTAGTGCCGCCCCTGCTAAGAAACCCTACCGTAAGGCACCACCAGAGCATCGGGAGCTGCGTTTGGAAATTCCTGG
ATCCCGGCTTGAGCAGGAGGAACCCCTGACTGATGCAGAAAGGATGAAGCTCTTACAGCAGGAGAATGAAGAGCTTCGCC
GGCGCCTGGCCTCCGCCACCAGACGCACTGAGGCCCTGGAACGTGAGCTGGAAATTGGGCAGGACTGCCTGGAGCTGGAG
CTGGGCCAGAGCCGCGAGGAGCTGGACAAATTTAAGGATAAGTTCCGCAGGCTGCAGAACAGCTACACGGCTTCCCAGCG
GACCAACCAGGAGTTGGAGGACAAGCTGCACACACTGATCAAGAAGGCTGAGATGGATAGGAAGACGCTGGACTGGGAGA
TTGTGGAGCTGACCAACAAGCTGTTGGATGCCAAGAACACCATCAACAAGCTGGAAGAGCTCAATGAGCGGTACCGGCTG
GACTGCAACCTGGCTGTACAGCTCCTCAAGTGCAACAAGTCCCACTTCCGAAACCACAAGTTTGCCGATCTGCCCTGTGA
GCTACAGGACATGGTTCGGAAACATTTGCACAGTGGTCAAGAGGCCGCCAGCCCAGGTCCTGCTCCCAGCCTAGCCCCAG
GGGCTGTGGTGCCTACCTCAGTCATTGCCCGAGTGTTAGAGAAGCCAGAGTCTCTACTGCTCAATTCAGCCCAGTCAGGC
AGCGCCGGGCGCCCCTTGGCTGAGGATGTCTTTGTGCATGTGGACATGAGTGAGGGTGTCCCAGGTGATCCAGCCAGTCC
CCCGGCCCCTGGCAGCCCCACCCCACAACCCAATGGGGAGTGCCACTCTCTGGGTACTGCCAGGGGCTCCCCGGAGGAAG
AGCTGCCCTTGCCAGCCTTTGAGAAGCTGAACCCCTACCCAACCCCATCTCCACCACACCCACTGTATCCTGGCCGCAGG
GTAATAGAGTTCTCTGAGGATAAGGTTCAGATCCCCCGCAACAGCCCCCTGCCCAACTGCACTTACGCTACCCGCCAGGC
CATTTCCCTGAGCCTGGTAGAGGAGGGGAGTGAGCGGGCCCGCCCCAGCCCAGTGCCCAGCACCCCTGCCTCAGCCCAGG
CCTCACCCCACCACCAGCCCAGCCCAGCGCCCCTAACACTCAGTGCCCCAGCTAGCTCTGCCAGCTCTGAAGAGGACCTG
CTGGTCAGCTGGCAGCGGGCATTTGTGGACCGTACTCCACCACCTGCTGCTGTGGCCCAGCGCACAGCCTTTGGACGCGA
TGCCCTCCCTGAGCTGCAGCGCCATTTTGCCCATAGCCCCGCTGACAGAGATGAGGTGGTCCAGGCACCTTCTGCCCGAC
CCGAAGAGAGTGAGCTTTTGCTACCCACAGAACCTGACTCTGGCTTTCCCAGGGAGGAAGAAGAGCTGAACCTGCCTATC
AGTCCTGAGGAAGAGCGCCAGAGCCTGCTGCCCATTAACAGTGGCACAGAGGAGGGGCCAGGCACTTCCCACACCGAGGG
CAGGGCCTGGCCACTCCCCAGCTCCAGTCGTCCCCAGCGCAGCCCCAAGAGGATGGGGGTTCACCACCTGCACCGCAAGG
ACAGCCTGACCCAGGCCCAGGAGCAGGGCAACCTGCTCAACTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 63 .53 RPM |
| SRP007412_cerebellum | 35 .49 RPM |
| SRP007412_heart | 10 .73 RPM |
| SRP007412_kidney | 31 .51 RPM |
| SRP007412_liver | 21 .77 RPM |
| SRP007412_testis | 16 .76 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000137221 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000015185 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000016642 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_3267 | 82.04 | 74.95 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000018199 retrocopies