Parental gene: | TJAP1, ENSPPYG00000016642 |
| Aliases: | None |
| Description: | tight junction-associated protein 1 [Source:RefSeq peptide;Acc:NP_001125176] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 6:43598157..43605360(+) |
>ENSPPYG00000016642
ATGACCAGTGCCGCCCCTGCTAAGAAACCCTACCGTAAGGCACCACCAGAGCATCGGGAGCTGCGTTTGGAAATTCCTGG
ATCCCGGCTTGAGCAGGAGGAACCCCTGACTGACGCAGAAAGGATGAAGCTCTTGCAGCAGGAGAATGAAGAGCTTCGCC
GGCGCCTGGCCTCCGCCACCAGACGCACTGAGGCCCTGGAACGTGAGCTGGAAATCGGGCAGGACTGCCTGGAGCTGGAG
CTGGGCCAGAGCCGCGAGGAGCTGGACAAATTTAAGGATAAGTTTCGCAGGCTGCAGAACAGCTACACAGCTTCCCAGCG
GACCAACCAGGAGTTGGAGGACAAGCTGCACACACTGGCCTCTCTTAGCCACAGCTGGATTTTTGCAATCAAGAAGGCTG
AGATGGATAGGAAGACGCTGGACTGGGAGATTGTGGAGCTGACCAACAAGCTGCTGGATGCCAAGAACACCATCAACAAG
CTGGAAGAGCTCAATGAGCGGTATCGGCTGGACTGCAACCTGGCTGTACAGCTCCTCAAGTGCAACAAGTCCCACTTCCG
AAACCACAAGTTTGCCGATCTGCCCTGTGAGCTACAGGACATGGTTCAGAAACATCTGCACAGTGGTCAAGAGGCCGCCA
GCCCAGGTCCTGCTCCCAGCCTAGCCCCAGGGGCTGTGGTACCTACCTCAGTCATTGCCCGAGTGTTAGAGAAGCCGGAG
TCTCTACTGCTTAATTCAGCCCAGTCAGGCAGTGCCGGGCGCCCCTTGGCTGAGGATGTCTTTGTGCATGTGGACATGAG
TGAGGGTGTCCCAGGTGATCCAGCCAGTCCCCCGGTGCCTGGCAGCCCCACCCCGCAACCCAATGGGGAGTGCCACTCTC
TGAGTACTGCCAGGGGCTCCCCGGAGGAAGAGCTGCCCCTGCCAGCCTTTGAGAAGCTGAGCCCCTACCCAACCCCGTCT
CCACCACACCCACTGTATCCTGGCCGCAGGGTAATAGAGTTCTCTGAGGATAAGGTTCGGATCCCCCACAACAGCCCCCT
GCCCAACTGCACTTATGCTACCCGCCAGGCCATTTCCCTGAGCTTGGTAGAGGAGGGGAGTGAGCGGGCCCGCCCCAGCC
CAGTGCCCAGCACCCCTGCCTCAGCCCAGGCCTCACCCCACCACCAGCCCAGCCCAGCGCCCCTAACACTCAGTGCCCCA
GCTAGCTCTGCCAGCTCGGAAGAGGACCTGCTGGTCAGCTGGCAGCGGGCATTTGTGGACCGTACTCCGCCACCTGCCGC
TGTGGCCCAGCGCACAGCCTTTGGACGTGACGCCCTCCCTGAGCTGCAGCGCCATTTTGCCCATAGCCCCGCTGACAGAG
ATGAGGTGGTCCAGGCACCTTCTCCCCGACCCGAAGAGAGTGAGCTTTTGCTACCCACAGAACCTGACTCTGGCTTTCCC
AGGGAGGAAGAAGAAGAGCTGAACCTGCCCATCGGTCCTGAGGAAGAGCGCCAGAGCCTGCTGCCCATTAACAGTGGCAC
ACAGGAGGGGCCAGGCACTTCCCACACTGAGGGCAGGGCCTGGCCACTCCCCAGCTCCAGTCGCCCCCAGCGCAGCCCCA
AGAGGATGGGGGTTCACCACCTGCACCGCAAGGACAGCCTGACCCAGGCCCAGGAGCAGGGCAACCTGCTCAACTAG
ATGACCAGTGCCGCCCCTGCTAAGAAACCCTACCGTAAGGCACCACCAGAGCATCGGGAGCTGCGTTTGGAAATTCCTGG
ATCCCGGCTTGAGCAGGAGGAACCCCTGACTGACGCAGAAAGGATGAAGCTCTTGCAGCAGGAGAATGAAGAGCTTCGCC
GGCGCCTGGCCTCCGCCACCAGACGCACTGAGGCCCTGGAACGTGAGCTGGAAATCGGGCAGGACTGCCTGGAGCTGGAG
CTGGGCCAGAGCCGCGAGGAGCTGGACAAATTTAAGGATAAGTTTCGCAGGCTGCAGAACAGCTACACAGCTTCCCAGCG
GACCAACCAGGAGTTGGAGGACAAGCTGCACACACTGGCCTCTCTTAGCCACAGCTGGATTTTTGCAATCAAGAAGGCTG
AGATGGATAGGAAGACGCTGGACTGGGAGATTGTGGAGCTGACCAACAAGCTGCTGGATGCCAAGAACACCATCAACAAG
CTGGAAGAGCTCAATGAGCGGTATCGGCTGGACTGCAACCTGGCTGTACAGCTCCTCAAGTGCAACAAGTCCCACTTCCG
AAACCACAAGTTTGCCGATCTGCCCTGTGAGCTACAGGACATGGTTCAGAAACATCTGCACAGTGGTCAAGAGGCCGCCA
GCCCAGGTCCTGCTCCCAGCCTAGCCCCAGGGGCTGTGGTACCTACCTCAGTCATTGCCCGAGTGTTAGAGAAGCCGGAG
TCTCTACTGCTTAATTCAGCCCAGTCAGGCAGTGCCGGGCGCCCCTTGGCTGAGGATGTCTTTGTGCATGTGGACATGAG
TGAGGGTGTCCCAGGTGATCCAGCCAGTCCCCCGGTGCCTGGCAGCCCCACCCCGCAACCCAATGGGGAGTGCCACTCTC
TGAGTACTGCCAGGGGCTCCCCGGAGGAAGAGCTGCCCCTGCCAGCCTTTGAGAAGCTGAGCCCCTACCCAACCCCGTCT
CCACCACACCCACTGTATCCTGGCCGCAGGGTAATAGAGTTCTCTGAGGATAAGGTTCGGATCCCCCACAACAGCCCCCT
GCCCAACTGCACTTATGCTACCCGCCAGGCCATTTCCCTGAGCTTGGTAGAGGAGGGGAGTGAGCGGGCCCGCCCCAGCC
CAGTGCCCAGCACCCCTGCCTCAGCCCAGGCCTCACCCCACCACCAGCCCAGCCCAGCGCCCCTAACACTCAGTGCCCCA
GCTAGCTCTGCCAGCTCGGAAGAGGACCTGCTGGTCAGCTGGCAGCGGGCATTTGTGGACCGTACTCCGCCACCTGCCGC
TGTGGCCCAGCGCACAGCCTTTGGACGTGACGCCCTCCCTGAGCTGCAGCGCCATTTTGCCCATAGCCCCGCTGACAGAG
ATGAGGTGGTCCAGGCACCTTCTCCCCGACCCGAAGAGAGTGAGCTTTTGCTACCCACAGAACCTGACTCTGGCTTTCCC
AGGGAGGAAGAAGAAGAGCTGAACCTGCCCATCGGTCCTGAGGAAGAGCGCCAGAGCCTGCTGCCCATTAACAGTGGCAC
ACAGGAGGGGCCAGGCACTTCCCACACTGAGGGCAGGGCCTGGCCACTCCCCAGCTCCAGTCGCCCCCAGCGCAGCCCCA
AGAGGATGGGGGTTCACCACCTGCACCGCAAGGACAGCCTGACCCAGGCCCAGGAGCAGGGCAACCTGCTCAACTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 14 .76 RPM |
| SRP007412_cerebellum | 25 .66 RPM |
| SRP007412_heart | 4 .52 RPM |
| SRP007412_kidney | 14 .98 RPM |
| SRP007412_liver | 7 .62 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000137221 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000015185 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000018199 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_3811 | 78.12 | 86.02 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000016642 retrocopies