Parental gene:

CDCA7, ENSG00000144354

Aliases:CDCA7, JPO1
Description:cell division cycle associated 7 [Source:HGNC Symbol;Acc:14628]
Organism:Human (Homo sapiens)
Coordinates:2:174219547..174233725(+)


>ENSG00000144354
ATGGACGCTCGCCGCGTGCCGCAGAAAGATCTCAGAGTAAAGAAGAACTTAAAGAAATTCAGATATGTGAAGTTGATTTC
CATGGAAACCTCGTCATCCTCTGATGACAGTTGTGACAGCTTTGCTTCTGATAATTTTGCAAACACGAAACCTAAATTCA
GGTCAGATATCAGTGAAGAACTGGCAAATGTTTTTTATGAGGACTCTGATAATGAATCTTTCTGCGGCTTTTCAGAAAGT
GAGGTGCAAGATGTATTAGACCATTGTGGATTTTTACAGAAACCAAGGCCAGATGTCACTAACGAACTGGCCGGTATTTT
TCATGCCGACTCTGACGATGAATCATTTTGCGGTTTCTCAGAGAGTGAGATACAAGATGGAATGAGGCTGCAGTCAGTTC
GGGAAGGCTGTAGGACCCGCAGCCAGTGCAGGCACTCTGGACCTCTCAGGGTGGCGATGAAGTTTCCAGCGCGGAGTACC
AGGGGAGCAACCAACAAAAAAGCAGAGTCCCGCCAGCCCTCAGAGAATTCTGTGACTGATTCCAACTCCGATTCAGAAGA
TGAAAGTGGAATGAATTTTTTGGAGAAAAGGGCTTTAAATATAAAGCAAAACAAAGCAATGCTTGCAAAACTCATGTCTG
AATTAGAAAGCTTCCCTGGCTCGTTCCGTGGAAGACATCCCCTCCCAGGCTCCGACTCACAATCAAGGAGACCGCGAAGG
CGTACATTCCCGGGTGTTGCTTCCAGGAGAAACCCTGAACGGAGAGCTCGTCCTCTTACCAGGTCAAGGTCCCGGATCCT
CGGGTCCCTTGACGCTCTACCCATGGAGGAGGAGGAGGAAGAGGATAAGTACATGTTGGTGAGAAAGAGGAAGACCGTGG
ATGGCTACATGAATGAAGATGACCTGCCCAGAAGCCGTCGCTCCAGATCATCCGTGACCCTTCCGCATATAATTCGCCCA
GTGGAAGAAATTACAGAGGAGGAGTTGGAGAACGTCTGCAGCAATTCTCGAGAGAAGATATATAACCGTTCACTGGGCTC
TACTTGTCATCAATGCCGTCAGAAGACTATTGATACCAAAACAAACTGCAGAAACCCAGACTGCTGGGGCGTTCGAGGCC
AGTTCTGTGGCCCCTGCCTTCGAAACCGTTATGGTGAAGAGGTCAGGGATGCTCTGCTGGATCCGAACTGGCATTGCCCG
CCTTGTCGAGGAATCTGCAACTGCAGTTTCTGCCGGCAGCGAGATGGACGGTGTGCGACTGGGGTCCTTGTGTATTTAGC
CAAATATCATGGCTTTGGGAATGTGCATGCCTACTTGAAAAGCCTGAAACAGGAATTTGAAATGCAAGCATAA

Library Parental gene expression (RPM)
bodymap2_liver 0 .06 RPM
bodymap2_lung 2 .67 RPM
bodymap2_breast 2 .35 RPM
bodymap2_adipose 1 .65 RPM
bodymap2_adrenal 6 .53 RPM
bodymap2_skeletal_muscle 6 .38 RPM
bodymap2_thyroid 1 .60 RPM
bodymap2_prostate 3 .07 RPM
bodymap2_colon 14 .93 RPM
bodymap2_testis 17 .89 RPM
bodymap2_brain 1 .66 RPM
bodymap2_heart 1 .81 RPM
bodymap2_white_blood_cells 2 .64 RPM
bodymap2_lymph_node 6 .36 RPM
bodymap2_ovary 1 .43 RPM
bodymap2_kidney 0 .81 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000007809 ortholog_one2one 1 retrogene
retro_cjac_4087,
Cavia porcellus ENSCPOG00000011784 ortholog_one2many 2 retrogenes
retro_cpor_661, retro_cpor_691,
Mus musculus ENSMUSG00000055612 ortholog_one2one 2 retrogenes
retro_mmus_1493, retro_mmus_1494,
Nomascus leucogenys ENSNLEG00000005787 ortholog_one2one 1 retrogene
retro_nleu_2295,
Pan troglodytes ENSPTRG00000012645 ortholog_one2one 1 retrogene
retro_ptro_2331,
Ictidomys tridecemlineatus ENSSTOG00000009026 ortholog_one2one 1 retrogene
retro_itri_369,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_3438 71.65 77.51
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Download FASTA sequences of all ENSG00000144354 retrocopies