Parental gene: | SSBP2, ENSG00000145687 |
| Aliases: | None |
| Description: | single-stranded DNA binding protein 2 [Source:HGNC Symbol;Acc:15831] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 5:80708839..81047616(-) |
>ENSG00000145687
ATGTACGGCAAAGGCAAGAGTAACAGCAGCGCCGTCCCGTCCGACAGCCAGGCCCGGGAGAAGTTAGCACTCTACGTATA
TGAATATCTGCTCCATGTAGGAGCTCAGAAATCAGCTCAAACATTTTTATCAGAGATAAGATGGGAAAAAAACATCACAT
TGGGGGAACCACCAGGATTCTTACATTCTTGGTGGTGTGTATTTTGGGATCTCTACTGTGCAGCTCCAGAGAGACGTGAA
ACATGTGAACACTCAAGTGAAGCAAAAGCCTTCCATGATTACAGTGCTGCAGCAGCTCCCAGTCCAGTGCTAGGAAACAT
TCCCCCAGGAGATGGCATGCCAGTAGGTCCTGTACCACCAGGGTTCTTTCAGCCTTTTATGTCACCTCGGTACCCTGGAG
GTCCAAGGCCCCCATTGAGGATACCTAATCAGGCACTTGGAGGTGTCCCAGGAAGTCAGCCATTACTCCCCAGTGGAATG
GATCCAACTCGACAACAAGGACATCCAAATATGGGTGGGCCAATGCAGAGAATGACTCCTCCAAGAGGAATGGTGCCCTT
AGGACCACAGAACTATGGAGGTGCAATGAGACCCCCACTGAATGCTTTAGGTGGCCCTGGAATGCCTGGAATGAACATGG
GTCCAGGTGGTGGTAGACCTTGGCCAAACCCAACAAATGCCAATTCAATACCATACTCCTCAGCATCTCCTGGGAATTAT
GTAGGTCCTCCAGGAGGTGGAGGGCCACCAGGAACACCCATCATGCCTAGTCCAGCAGATTCAACCAACTCTGGTGATAA
CATGTATACTTTAATGAATGCAGTACCTCCTGGACCTAACAGACCTAATTTTCCAATGGGTCCTGGGTCAGATGGTCCCA
TGGGTGGATTAGGAGGAATGGAGTCACATCACATGAATGGCTCTTTAGGCTCAGGAGATATGGACAGTATTTCCAAGAAT
TCTCCCAATAATATGAGCCTGAGTAATCAACCGGGCACTCCAAGGGATGATGGCGAAATGGGGGGAAATTTCTTAAATCC
TTTTCAGAGTGAGAGTTACTCCCCTAGCATGACAATGAGCGTGTGA
ATGTACGGCAAAGGCAAGAGTAACAGCAGCGCCGTCCCGTCCGACAGCCAGGCCCGGGAGAAGTTAGCACTCTACGTATA
TGAATATCTGCTCCATGTAGGAGCTCAGAAATCAGCTCAAACATTTTTATCAGAGATAAGATGGGAAAAAAACATCACAT
TGGGGGAACCACCAGGATTCTTACATTCTTGGTGGTGTGTATTTTGGGATCTCTACTGTGCAGCTCCAGAGAGACGTGAA
ACATGTGAACACTCAAGTGAAGCAAAAGCCTTCCATGATTACAGTGCTGCAGCAGCTCCCAGTCCAGTGCTAGGAAACAT
TCCCCCAGGAGATGGCATGCCAGTAGGTCCTGTACCACCAGGGTTCTTTCAGCCTTTTATGTCACCTCGGTACCCTGGAG
GTCCAAGGCCCCCATTGAGGATACCTAATCAGGCACTTGGAGGTGTCCCAGGAAGTCAGCCATTACTCCCCAGTGGAATG
GATCCAACTCGACAACAAGGACATCCAAATATGGGTGGGCCAATGCAGAGAATGACTCCTCCAAGAGGAATGGTGCCCTT
AGGACCACAGAACTATGGAGGTGCAATGAGACCCCCACTGAATGCTTTAGGTGGCCCTGGAATGCCTGGAATGAACATGG
GTCCAGGTGGTGGTAGACCTTGGCCAAACCCAACAAATGCCAATTCAATACCATACTCCTCAGCATCTCCTGGGAATTAT
GTAGGTCCTCCAGGAGGTGGAGGGCCACCAGGAACACCCATCATGCCTAGTCCAGCAGATTCAACCAACTCTGGTGATAA
CATGTATACTTTAATGAATGCAGTACCTCCTGGACCTAACAGACCTAATTTTCCAATGGGTCCTGGGTCAGATGGTCCCA
TGGGTGGATTAGGAGGAATGGAGTCACATCACATGAATGGCTCTTTAGGCTCAGGAGATATGGACAGTATTTCCAAGAAT
TCTCCCAATAATATGAGCCTGAGTAATCAACCGGGCACTCCAAGGGATGATGGCGAAATGGGGGGAAATTTCTTAAATCC
TTTTCAGAGTGAGAGTTACTCCCCTAGCATGACAATGAGCGTGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 3 .76 RPM |
| bodymap2_lung | 40 .52 RPM |
| bodymap2_breast | 46 .93 RPM |
| bodymap2_adipose | 41 .74 RPM |
| bodymap2_adrenal | 27 .96 RPM |
| bodymap2_skeletal_muscle | 25 .55 RPM |
| bodymap2_thyroid | 36 .27 RPM |
| bodymap2_prostate | 74 .15 RPM |
| bodymap2_colon | 55 .55 RPM |
| bodymap2_testis | 46 .23 RPM |
| bodymap2_brain | 59 .16 RPM |
| bodymap2_heart | 29 .57 RPM |
| bodymap2_white_blood_cells | 39 .14 RPM |
| bodymap2_lymph_node | 38 .05 RPM |
| bodymap2_ovary | 105 .31 RPM |
| bodymap2_kidney | 25 .04 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000130511 | within_species_paralog | 1 retrogene | |
| Homo sapiens | ENSG00000157216 | within_species_paralog | 6 retrogenes | |
| Macaca mulatta | ENSMMUG00000017583 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000003992 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_3622 | 68.83 | 71.98 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000145687 retrocopies