Parental gene: | GXYLT1, ENSG00000151233 |
| Aliases: | GXYLT1, GLT8D3 |
| Description: | glucoside xylosyltransferase 1 [Source:HGNC Symbol;Acc:27482] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 12:42475646..42538681(-) |
>ENSG00000151233
ATGCGGCGCTACCTGCGCGTCGTGGTGCTGTGTGTGGCCTGCGGCTTCTGCTCGCTCCTTTACGCTTTCAGCCAGCTCGC
CGTGTCCCTGGAAGAAGGAACGGGCGGCGGTGGCGGGAAGCCGCAGGCCGCGGTGGCTTCCTGGCTCGCGGGCGGCGGAC
GCGGCGCCGTGAGAGGCGCCGGCGTCGCGGGCCCCGCAGCGCATCCCGGCGTGTCGGACAGGTGTAAAGATTTCTCTCTG
TGTTACTGGAATCCCTATTGGATGCTGCCCTCTGATGTTTGTGGAATGAACTGCTTTTGGGAAGCGGCTTTTAGGTACAG
TCTGAAAATACAGCCTGTTGAGAAAATGCATCTAGCTGTAGTTGCCTGTGGTGAAAGACTGGAAGAAACTATGACCATGT
TGAAGTCAGCTATCATTTTCAGCATCAAACCTCTTCAATTCCATATTTTTGCTGAAGATCAGCTACATCATAGCTTTAAA
GGCAGACTTGACAACTGGTCATTTCTACAAACATTTAATTATACGTTATACCCCATAACCTTTCCAAGTGAGAATGCAGC
AGAGTGGAAAAAACTCTTTAAACCATGTGCTTCGCAGAGATTGTTCTTGCCGTTAATCCTGAAAGAAGTTGACTCACTAT
TGTATGTCGACACTGATATCCTTTTTTTACGACCAGTTGATGATATTTGGTCTTTACTAAAGAAATTTAATTCCACACAA
ATTGCTGCAATGGCACCAGAACATGAGGAACCTCGAATAGGATGGTATAATCGCTTTGCTAGGCATCCATATTATGGAAA
AACTGGAGTAAACTCTGGAGTTATGTTGATGAACATGACTCGAATGAGAAGGAAGTATTTCAAGAATGATATGACAACTG
TACGACTACAATGGGGAGATATACTTATGCCATTGCTTAAAAAATACAAACTAAACATCACATGGGGTGATCAAGATCTA
TTGAATATCGTGTTTTTTCATAATCCAGAAAGCCTTTTTGTTTTTCCGTGTCAATGGAATTATCGACCAGATCATTGTAT
ATATGGAAGCAATTGCCAAGAAGCAGAAGAAGGAGGAATCTTTATTCTTCATGGGAACAGAGGTGTTTACCATGACGATA
AGCAACCAGCATTTAGAGCTGTTTATGAAGCACTGAGAAATTGTTCTTTTGAAGATGACAACATCCGTTCCTTATTAAAA
CCTTTAGAACTGGAACTACAAAAAACAGTGCATACATACTGTGGAAAAATTTACAAAATATTTATCAAACAACTAGCAAA
AAGTGTAAGAGATCGTTATGCCAGATCACCAAAGGAAAAGTGA
ATGCGGCGCTACCTGCGCGTCGTGGTGCTGTGTGTGGCCTGCGGCTTCTGCTCGCTCCTTTACGCTTTCAGCCAGCTCGC
CGTGTCCCTGGAAGAAGGAACGGGCGGCGGTGGCGGGAAGCCGCAGGCCGCGGTGGCTTCCTGGCTCGCGGGCGGCGGAC
GCGGCGCCGTGAGAGGCGCCGGCGTCGCGGGCCCCGCAGCGCATCCCGGCGTGTCGGACAGGTGTAAAGATTTCTCTCTG
TGTTACTGGAATCCCTATTGGATGCTGCCCTCTGATGTTTGTGGAATGAACTGCTTTTGGGAAGCGGCTTTTAGGTACAG
TCTGAAAATACAGCCTGTTGAGAAAATGCATCTAGCTGTAGTTGCCTGTGGTGAAAGACTGGAAGAAACTATGACCATGT
TGAAGTCAGCTATCATTTTCAGCATCAAACCTCTTCAATTCCATATTTTTGCTGAAGATCAGCTACATCATAGCTTTAAA
GGCAGACTTGACAACTGGTCATTTCTACAAACATTTAATTATACGTTATACCCCATAACCTTTCCAAGTGAGAATGCAGC
AGAGTGGAAAAAACTCTTTAAACCATGTGCTTCGCAGAGATTGTTCTTGCCGTTAATCCTGAAAGAAGTTGACTCACTAT
TGTATGTCGACACTGATATCCTTTTTTTACGACCAGTTGATGATATTTGGTCTTTACTAAAGAAATTTAATTCCACACAA
ATTGCTGCAATGGCACCAGAACATGAGGAACCTCGAATAGGATGGTATAATCGCTTTGCTAGGCATCCATATTATGGAAA
AACTGGAGTAAACTCTGGAGTTATGTTGATGAACATGACTCGAATGAGAAGGAAGTATTTCAAGAATGATATGACAACTG
TACGACTACAATGGGGAGATATACTTATGCCATTGCTTAAAAAATACAAACTAAACATCACATGGGGTGATCAAGATCTA
TTGAATATCGTGTTTTTTCATAATCCAGAAAGCCTTTTTGTTTTTCCGTGTCAATGGAATTATCGACCAGATCATTGTAT
ATATGGAAGCAATTGCCAAGAAGCAGAAGAAGGAGGAATCTTTATTCTTCATGGGAACAGAGGTGTTTACCATGACGATA
AGCAACCAGCATTTAGAGCTGTTTATGAAGCACTGAGAAATTGTTCTTTTGAAGATGACAACATCCGTTCCTTATTAAAA
CCTTTAGAACTGGAACTACAAAAAACAGTGCATACATACTGTGGAAAAATTTACAAAATATTTATCAAACAACTAGCAAA
AAGTGTAAGAGATCGTTATGCCAGATCACCAAAGGAAAAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 20 .38 RPM |
| bodymap2_lung | 22 .94 RPM |
| bodymap2_breast | 24 .01 RPM |
| bodymap2_adipose | 32 .48 RPM |
| bodymap2_adrenal | 18 .16 RPM |
| bodymap2_skeletal_muscle | 8 .33 RPM |
| bodymap2_thyroid | 37 .79 RPM |
| bodymap2_prostate | 19 .59 RPM |
| bodymap2_colon | 31 .52 RPM |
| bodymap2_testis | 38 .01 RPM |
| bodymap2_brain | 14 .81 RPM |
| bodymap2_heart | 16 .39 RPM |
| bodymap2_white_blood_cells | 35 .08 RPM |
| bodymap2_lymph_node | 28 .32 RPM |
| bodymap2_ovary | 38 .32 RPM |
| bodymap2_kidney | 39 .52 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Gorilla gorilla | ENSGGOG00000027928 | ortholog_one2one | 3 retrogenes | |
| Monodelphis domestica | ENSMODG00000008913 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000036197 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000017947 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000004419 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000004836 | ortholog_one2one | 5 retrogenes | |
| Rattus norvegicus | ENSRNOG00000005234 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_2295 | 79.88 | 77.51 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_4167 | 81.11 | 72.05 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_hsap_4177 | 80.43 | 77.26 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_hsap_4258 | 80.80 | 72.05 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_hsap_4267 | 79.38 | 77.51 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000151233 retrocopies