Parental gene:

DPH3, ENSG00000154813

Aliases:None
Description:diphthamide biosynthesis 3 [Source:HGNC Symbol;Acc:27717]
Organism:Human (Homo sapiens)
Coordinates:3:16299484..16306479(-)


>ENSG00000154813
ATGGCAGTGTTTCATGACGAGGTGGAAATCGAGGACTTCCAATATGACGAGGACTCGGAGACGTATTTCTATCCCTGCCC
ATGTGGAGATAACTTCTCCATCACCAAGGAAGATTTGGAGAATGGGGAAGACGTGGCAACGTGTCCTAGCTGCTCTCTCA
TTATAAAAGTGATTTATGACAAAGATCAGTTTGTGTGTGGAGAAACAGTCCCAGCCCCTTCAGCCAACAAAGAATTAGTT
AAATGCTGA

Library Parental gene expression (RPM)
bodymap2_liver 25 .16 RPM
bodymap2_lung 32 .98 RPM
bodymap2_breast 37 .20 RPM
bodymap2_adipose 27 .27 RPM
bodymap2_adrenal 23 .38 RPM
bodymap2_skeletal_muscle 45 .83 RPM
bodymap2_thyroid 40 .54 RPM
bodymap2_prostate 36 .86 RPM
bodymap2_colon 39 .33 RPM
bodymap2_testis 41 .29 RPM
bodymap2_brain 25 .46 RPM
bodymap2_heart 34 .91 RPM
bodymap2_white_blood_cells 45 .83 RPM
bodymap2_lymph_node 38 .48 RPM
bodymap2_ovary 51 .57 RPM
bodymap2_kidney 49 .72 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000012030 possible_ortholog 1 retrogene
retro_dnov_39,
Dipodomys ordii ENSDORG00000011642 ortholog_one2one 1 retrogene
retro_dord_167,
Erinaceus europaeus ENSEEUG00000009790 possible_ortholog 1 retrogene
retro_eeur_502,
Echinops telfairi ENSETEG00000016272 possible_ortholog 1 retrogene
retro_etel_1879,
Gorilla gorilla ENSGGOG00000022108 ortholog_one2one 1 retrogene
retro_ggor_174,
Loxodonta africana ENSLAFG00000025650 possible_ortholog 3 retrogenes
retro_lafr_31, retro_lafr_545, retro_lafr_87,
Macaca mulatta ENSMMUG00000022692 ortholog_one2one 2 retrogenes
retro_mmul_2085, retro_mmul_497,
Monodelphis domestica ENSMODG00000025472 ortholog_one2many 3 retrogenes
retro_mdom_131, retro_mdom_1434, retro_mdom_609,
Mus musculus ENSMUSG00000021905 ortholog_one2one 1 retrogene
retro_mmus_196,
Nomascus leucogenys ENSNLEG00000001096 ortholog_one2one 2 retrogenes
retro_nleu_2876, retro_nleu_2913,
Pongo abelii ENSPPYG00000014083 ortholog_one2one 1 retrogene
retro_pabe_1795,
Pan troglodytes ENSPTRG00000014671 ortholog_one2one 1 retrogene
retro_ptro_1409,
Tupaia belangeri ENSTBEG00000011675 possible_ortholog 1 retrogene
retro_tbel_58,
Tursiops truncatus ENSTTRG00000007739 possible_ortholog 3 retrogenes
retro_ttru_1474, retro_ttru_31, retro_ttru_907,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_2438 89.02 100.00
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Download FASTA sequences of all ENSG00000154813 retrocopies