Parental gene:

ENSEEUG00000009790

Aliases:None
Description:None
Organism:Hedgehog (Erinaceus europaeus)
Coordinates:GeneScaffold_8755:13793..17583(+)


>ENSEEUG00000009790
ATGGCAGTGTTTCACGACGAGGTGGAGATAGAGGACTTCCAGTATGACGAGGACACGGAGTCGTATTTCTACCCCTGCCC
GTGTGGGGATAACTTTTGCATCACCAAGGAAGATCTGGAGAATGGAGAAGACGTGGCGACCTGTCCTAGCTGCTCTCTCA
TTATAAAAGTGATTTATGACAAAGATCAGTTCATGTGTGGAGAAACAGTCCCAGCCCCTTCTAGCAACAAAGAATTAGTT
AAATGCTAA

Library Parental gene expression (RPM)
SRP017611_liver 4 .82 RPM
SRP017611_kidney 7 .13 RPM
SRP017611_brain 5 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000003916 ortholog_one2one 2 retrogenes
retro_btau_797, retro_btau_967,
Canis familiaris ENSCAFG00000005881 ortholog_one2one 1 retrogene
retro_cfam_273,
Dasypus novemcinctus ENSDNOG00000012030 possible_ortholog 1 retrogene
retro_dnov_39,
Dipodomys ordii ENSDORG00000011642 possible_ortholog 1 retrogene
retro_dord_167,
Equus caballus ENSECAG00000016591 ortholog_one2one 1 retrogene
retro_ecab_1095,
Echinops telfairi ENSETEG00000016272 ortholog_one2many 1 retrogene
retro_etel_1879,
Felis catus ENSFCAG00000006355 ortholog_one2one 1 retrogene
retro_fcat_656,
Homo sapiens ENSG00000154813 possible_ortholog 1 retrogene
retro_hsap_2438,
Gorilla gorilla ENSGGOG00000022108 possible_ortholog 1 retrogene
retro_ggor_174,
Loxodonta africana ENSLAFG00000025650 ortholog_one2many 3 retrogenes
retro_lafr_31, retro_lafr_545, retro_lafr_87,
Macaca mulatta ENSMMUG00000022692 possible_ortholog 2 retrogenes
retro_mmul_2085, retro_mmul_497,
Monodelphis domestica ENSMODG00000025472 ortholog_many2many 3 retrogenes
retro_mdom_131, retro_mdom_1434, retro_mdom_609,
Mus musculus ENSMUSG00000021905 possible_ortholog 1 retrogene
retro_mmus_196,
Nomascus leucogenys ENSNLEG00000001096 possible_ortholog 2 retrogenes
retro_nleu_2876, retro_nleu_2913,
Oryctolagus cuniculus ENSOCUG00000015862 possible_ortholog 1 retrogene
retro_ocun_1662,
Pongo abelii ENSPPYG00000014083 possible_ortholog 1 retrogene
retro_pabe_1795,
Pan troglodytes ENSPTRG00000014671 possible_ortholog 1 retrogene
retro_ptro_1409,
Tupaia belangeri ENSTBEG00000011675 possible_ortholog 1 retrogene
retro_tbel_58,
Tursiops truncatus ENSTTRG00000007739 ortholog_one2many 3 retrogenes
retro_ttru_1474, retro_ttru_31, retro_ttru_907,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_eeur_502 74.19 73.17
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Download FASTA sequences of all ENSEEUG00000009790 retrocopies