Parental gene:

CHAF1B, ENSG00000159259

Aliases:None
Description:chromatin assembly factor 1, subunit B (p60) [Source:HGNC Symbol;Acc:1911]
Organism:Human (Homo sapiens)
Coordinates:21:37757675..37789125(+)


>ENSG00000159259
ATGAAAGTCATCACTTGTGAAATAGCCTGGCACAACAAGGAGCCCGTGTACAGCCTGGACTTCCAGCATGGGACGGCTGG
GAGGATCCACAGACTGGCGTCTGCCGGCGTGGACACCAATGTCAGGATCTGGAAGGTAGAAAAGGGACCAGATGGAAAAG
CCATCGTGGAATTTTTGTCCAATCTTGCTCGTCATACCAAAGCCGTCAATGTTGTGCGTTTTTCTCCAACTGGGGAAATT
TTAGCATCGGGAGGAGATGATGCTGTCATCCTATTGTGGAAGGTGAATGATAACAAGGAGCCGGAGCAGATCGCTTTTCA
GGATGAGGACGAGGCCCAGCTGAACAAGGAGAACTGGACGGTTGTGAAGACTCTGCGGGGCCACTTAGAAGATGTGTATG
ATATTTGCTGGGCAACTGATGGGAATTTAATGGCTTCTGCCTCTGTGGATAACACAGCCATCATATGGGATGTCAGCAAA
GGACAAAAGATATCAATTTTTAATGAACATAAAAGTTATGTCCAAGGAGTAACCTGGGACCCTTTGGGTCAATATGTTGC
TACTCTGAGCTGTGACAGGGTGCTGCGAGTATACAGTATACAGAAGAAGCGTGTGGCTTTCAATGTTTCGAAGATGCTGT
CTGGAATAGGGGCTGAAGGAGAGGCAAGAAGCTACCGGATGTTTCACGACGACAGCATGAAGTCTTTCTTCCGTAGACTG
AGTTTCACTCCCGACGGATCTTTGCTTCTCACGCCAGCTGGATGTGTGGAATCTGGTGAAAATGTAATGAATACCACTTA
TGTTTTCTCCAGGAAGAATCTTAAAAGGCCCATCGCTCATCTTCCATGTCCTGGAAAAGCCACTCTTGCTGTTCGCTGCT
GTCCGGTCTACTTTGAACTGAGGCCAGTGGTGGAAACAGGTGTGGAGCTGATGAGTCTGCCCTACCGCCTGGTGTTTGCT
GTGGCCTCGGAGGATTCCGTGCTTCTGTATGACACCCAGCAGTCCTTCCCTTTTGGTTACGTGTCTAATATACATTACCA
CACCCTCAGTGACATTTCATGGTCCAGCGATGGTGCCTTCCTGGCCATTTCTTCCACGGACGGTTACTGCTCATTTGTGA
CATTTGAGAAAGATGAACTTGGAATTCCTTTGAAAGAGAAGCCAGTTTTGAACATGAGAACTCCTGATACAGCAAAGAAA
ACCAAGAGTCAGACACATCGAGGGTCTTCGCCAGGACCCAGACCGGTAGAGGGAACCCCTGCCAGCAGAACCCAAGACCC
CAGCAGCCCCGGCACGACTCCCCCTCAGGCCAGACAGGCCCCAGCCCCAACAGTCATCAGGGACCCTCCCTCCATCACTC
CTGCTGTCAAAAGCCCCTTGCCGGGGCCTTCGGAGGAGAAGACCCTGCAGCCCAGTAGTCAAAACACAAAAGCCCACCCA
TCCCGGAGGGTCACTCTGAACACACTGCAAGCCTGGAGCAAGACAACACCCCGGAGAATAAACTTAACACCCTTAAAGAC
GGACACTCCACCAAGTTCTGTACCAACCAGTGTGATTTCCACCCCTTCTACAGAAGAAATTCAGTCAGAGACGCCTGGAG
ACGCTCAGGGCAGTCCCCCAGAGCTAAAGCGGCCCAGACTCGATGAAAACAAAGGAGGCACGGAAAGTCTGGACCCTTGA

Library Parental gene expression (RPM)
bodymap2_liver 0 .25 RPM
bodymap2_lung 1 .97 RPM
bodymap2_breast 3 .77 RPM
bodymap2_adipose 4 .15 RPM
bodymap2_adrenal 5 .22 RPM
bodymap2_skeletal_muscle 16 .95 RPM
bodymap2_thyroid 6 .21 RPM
bodymap2_prostate 2 .39 RPM
bodymap2_colon 1 .10 RPM
bodymap2_testis 8 .69 RPM
bodymap2_brain 7 .90 RPM
bodymap2_heart 0 .89 RPM
bodymap2_white_blood_cells 2 .95 RPM
bodymap2_lymph_node 0 .75 RPM
bodymap2_ovary 3 .66 RPM
bodymap2_kidney 0 .95 RPM



Species Parental gene accession Homology type Retrogenes number
Gorilla gorilla ENSGGOG00000015726 ortholog_one2one 1 retrogene
retro_ggor_2369,
Nomascus leucogenys ENSNLEG00000004429 ortholog_one2one 1 retrogene
retro_nleu_797,
Pongo abelii ENSPPYG00000011403 ortholog_one2one 1 retrogene
retro_pabe_2898,
Pan troglodytes ENSPTRG00000013891 ortholog_one2one 1 retrogene
retro_ptro_2375,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_3504 84.40 69.59
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Download FASTA sequences of all ENSG00000159259 retrocopies