Parental gene: | CHAF1B, ENSPTRG00000013891 |
| Aliases: | None |
| Description: | None |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 21:22488933..22520091(+) |
>ENSPTRG00000013891
ATGAAAGTCATCACTTGTGAAATAGCCTGGCACAACAAGGAGCCCGTGTACAGCCTGGACTTCCAGCATGGGACGGCTGG
GAGGATCCACAGACTGGCGTCTGCCGGCGTGGACACCAATGTCAGGATCTGGAAGGTAGAAAAGGGACCAGATGGAAAAG
CCATCGTGGAATTTTTGTCCAATCTTGCTCGTCATACCAAAGCCGTCAATGTTGTGCGTTTTTCTCCAACTGGGGAAATT
TTAGCATCGGGAGGAGATGATGCTGTCATCCTGTTGTGGAAGGTGAATGATAACAAGGAGCCGGAGCAGATCGCTTTTCA
GGATGAGGACGAGGCCCAGCTGAACAAGGAGAACTGGACGGTTGTGAAGACTCTGCGGGGCCACTTAGAAGATGTGTATG
ATATTTGCTGGGCAACTGATGGGAATTTAATGGCTTCTGCCTCTGTGGATAACACAGCCATCATATGGGATGTCAGCAAA
GGACAAAAGATATCAATTTTTAATGAACATAAAAGTTATGTCCAAGGAGTAACCTGGGACCCTTTGGGTCAATATGTTGC
TACTCTGAGCTGTGACAGGGTGCTGCGAGTATACAGTATACAGAAGAAGCGTGTGGCTTTCAATGTTTCGAAGATGCTGT
CTGGAATAGGGGCTGAAGGAGAGGCAAGAAGCTACCGGATGTTTCACGACGACAGCATGAAGTCTTTCTTCCGTAGACTG
AGTTTCACTCCCGACGGATCTTTGCTCCTCACGCCAGCTGGATGTGTGGAATCTGGTGAAAATGTAATGAATACCACTTA
TGTTTTCTCCAGGAAGAATCTTAAAAGGCCCATCGCTCATCTTCCATGTCCTGGAAAAGCCACTCTTGCTGTTCGCTGCT
GTCCGGTCTACTTTGAACTGAGGCCAGTGGTGGAAACAGGTGTGGAGCTGATGAGTCTGCCCTACCGCCTGGTGTTTGCT
GTGGCCTCGGAGGACTCCGTGCTTCTGTATGACACCCAGCAGTCCTTCCCTTTTGGTTACGTGTCTAATATACATTACCA
CACCCTCAGTGACATTTCATGGTCCAGCGATGGTGCCTTCCTGGCCATTTCTTCCACGGACGGTTACTGCTCATTTGTGA
CATTTGAGAAAGATGAACTTGGAATTCCTTTGAAAGAGAAGCCAGTTTTGAACATGAGAACTCCTGATACAGCAAAGAAA
ACCAAGAGTCAGACACATCGAGGGTCTTCGCCAGGACCCAGACCGGTAGAGGGAACCCCTGCCAGCAGAACCCAAGACCC
CAGCAGCCCCGGCACGACCCCCCCTCAGGCCAGACAGGCCCCAGCCCCAACAGCCATCAGGGACCCTCCCTCCATCACTC
CTGCTGTCAAAAGCCCCTTGCCGGGGCCTTCGGAGGAGAAGACCCTGCAGCCCAGTAGTCAAAACACAAAAGCCCACCCA
TCCCGGAGGGTCACTCTGAACACACTGCAAGCCTGGAGCAAGACAACACCACGGAGAATAAACTTAACACCCTTAAAGAC
AGACACTCCACCAAGTTCTGTACCAACCAGTGTGATTTCCACCCCTTCTACAGAAGAAATTCAGTCAGAGACGCCTGGAG
ACGCTCAGGGCAGTCCCCCAGAGCTAAAGCGGCCCAGACTCGATGAAAACAAAGGAGGCACGGAAACTCTGGACCCTTGA
ATGAAAGTCATCACTTGTGAAATAGCCTGGCACAACAAGGAGCCCGTGTACAGCCTGGACTTCCAGCATGGGACGGCTGG
GAGGATCCACAGACTGGCGTCTGCCGGCGTGGACACCAATGTCAGGATCTGGAAGGTAGAAAAGGGACCAGATGGAAAAG
CCATCGTGGAATTTTTGTCCAATCTTGCTCGTCATACCAAAGCCGTCAATGTTGTGCGTTTTTCTCCAACTGGGGAAATT
TTAGCATCGGGAGGAGATGATGCTGTCATCCTGTTGTGGAAGGTGAATGATAACAAGGAGCCGGAGCAGATCGCTTTTCA
GGATGAGGACGAGGCCCAGCTGAACAAGGAGAACTGGACGGTTGTGAAGACTCTGCGGGGCCACTTAGAAGATGTGTATG
ATATTTGCTGGGCAACTGATGGGAATTTAATGGCTTCTGCCTCTGTGGATAACACAGCCATCATATGGGATGTCAGCAAA
GGACAAAAGATATCAATTTTTAATGAACATAAAAGTTATGTCCAAGGAGTAACCTGGGACCCTTTGGGTCAATATGTTGC
TACTCTGAGCTGTGACAGGGTGCTGCGAGTATACAGTATACAGAAGAAGCGTGTGGCTTTCAATGTTTCGAAGATGCTGT
CTGGAATAGGGGCTGAAGGAGAGGCAAGAAGCTACCGGATGTTTCACGACGACAGCATGAAGTCTTTCTTCCGTAGACTG
AGTTTCACTCCCGACGGATCTTTGCTCCTCACGCCAGCTGGATGTGTGGAATCTGGTGAAAATGTAATGAATACCACTTA
TGTTTTCTCCAGGAAGAATCTTAAAAGGCCCATCGCTCATCTTCCATGTCCTGGAAAAGCCACTCTTGCTGTTCGCTGCT
GTCCGGTCTACTTTGAACTGAGGCCAGTGGTGGAAACAGGTGTGGAGCTGATGAGTCTGCCCTACCGCCTGGTGTTTGCT
GTGGCCTCGGAGGACTCCGTGCTTCTGTATGACACCCAGCAGTCCTTCCCTTTTGGTTACGTGTCTAATATACATTACCA
CACCCTCAGTGACATTTCATGGTCCAGCGATGGTGCCTTCCTGGCCATTTCTTCCACGGACGGTTACTGCTCATTTGTGA
CATTTGAGAAAGATGAACTTGGAATTCCTTTGAAAGAGAAGCCAGTTTTGAACATGAGAACTCCTGATACAGCAAAGAAA
ACCAAGAGTCAGACACATCGAGGGTCTTCGCCAGGACCCAGACCGGTAGAGGGAACCCCTGCCAGCAGAACCCAAGACCC
CAGCAGCCCCGGCACGACCCCCCCTCAGGCCAGACAGGCCCCAGCCCCAACAGCCATCAGGGACCCTCCCTCCATCACTC
CTGCTGTCAAAAGCCCCTTGCCGGGGCCTTCGGAGGAGAAGACCCTGCAGCCCAGTAGTCAAAACACAAAAGCCCACCCA
TCCCGGAGGGTCACTCTGAACACACTGCAAGCCTGGAGCAAGACAACACCACGGAGAATAAACTTAACACCCTTAAAGAC
AGACACTCCACCAAGTTCTGTACCAACCAGTGTGATTTCCACCCCTTCTACAGAAGAAATTCAGTCAGAGACGCCTGGAG
ACGCTCAGGGCAGTCCCCCAGAGCTAAAGCGGCCCAGACTCGATGAAAACAAAGGAGGCACGGAAACTCTGGACCCTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 4 .16 RPM |
| SRP007412_cerebellum | 15 .70 RPM |
| SRP007412_heart | 0 .99 RPM |
| SRP007412_kidney | 1 .99 RPM |
| SRP007412_liver | 1 .70 RPM |
| SRP007412_testis | 11 .80 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000159259 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000015726 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000004429 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000011403 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_2375 | 84.14 | 69.59 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000013891 retrocopies