Parental gene: | THEM4, ENSG00000159445 |
| Aliases: | None |
| Description: | thioesterase superfamily member 4 [Source:HGNC Symbol;Acc:17947] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 1:151846059..151882284(-) |
>ENSG00000159445
ATGCTGAGGAGCTGCGCCGCGCGCCTCCGCACGCTGGGGGCTCTGTGCCTGCCGCCAGTAGGCCGGCGCCTGCCGGGAAG
CGAGCCGCGACCCGAGCTGAGGTCATTTTCTTCTGAGGAAGTCATTCTTAAGGACTGTTCTGTCCCCAACCCCAGCTGGA
ACAAGGACCTAAGACTGCTCTTTGACCAGTTTATGAAGAAATGTGAAGACGGCTCCTGGAAACGTTTGCCTTCATATAAA
CGTACACCTACTGAATGGATTCAAGACTTCAAAACCCATTTTCTTGACCCAAAGCTTATGAAAGAAGAACAAATGTCACA
GGCCCAGCTCTTCACCAGAAGCTTTGATGATGGCCTGGGCTTTGAATACGTGATGTTCTACAATGACATTGAGAAAAGGA
TGGTTTGCTTATTTCAAGGAGGCCCTTACCTGGAAGGACCACCTGGATTCATTCATGGAGGTGCCATTGCAACCATGATT
GATGCTACTGTTGGTATGTGTGCAATGATGGCTGGGGGAATCGTCATGACTGCCAATCTCAACATCAATTATAAAAGACC
TATCCCTCTTTGTTCTGTTGTTATGATAAATAGCCAACTTGATAAAGTTGAAGGAAGGAAATTTTTTGTTTCCTGTAATG
TTCAGAGTGTTGATGAGAAGACCCTATACTCAGAGGCGACAAGCTTATTTATAAAGCTGAATCCTGCTAAAAGTCTGACA
TAA
ATGCTGAGGAGCTGCGCCGCGCGCCTCCGCACGCTGGGGGCTCTGTGCCTGCCGCCAGTAGGCCGGCGCCTGCCGGGAAG
CGAGCCGCGACCCGAGCTGAGGTCATTTTCTTCTGAGGAAGTCATTCTTAAGGACTGTTCTGTCCCCAACCCCAGCTGGA
ACAAGGACCTAAGACTGCTCTTTGACCAGTTTATGAAGAAATGTGAAGACGGCTCCTGGAAACGTTTGCCTTCATATAAA
CGTACACCTACTGAATGGATTCAAGACTTCAAAACCCATTTTCTTGACCCAAAGCTTATGAAAGAAGAACAAATGTCACA
GGCCCAGCTCTTCACCAGAAGCTTTGATGATGGCCTGGGCTTTGAATACGTGATGTTCTACAATGACATTGAGAAAAGGA
TGGTTTGCTTATTTCAAGGAGGCCCTTACCTGGAAGGACCACCTGGATTCATTCATGGAGGTGCCATTGCAACCATGATT
GATGCTACTGTTGGTATGTGTGCAATGATGGCTGGGGGAATCGTCATGACTGCCAATCTCAACATCAATTATAAAAGACC
TATCCCTCTTTGTTCTGTTGTTATGATAAATAGCCAACTTGATAAAGTTGAAGGAAGGAAATTTTTTGTTTCCTGTAATG
TTCAGAGTGTTGATGAGAAGACCCTATACTCAGAGGCGACAAGCTTATTTATAAAGCTGAATCCTGCTAAAAGTCTGACA
TAA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 9 .61 RPM |
| bodymap2_lung | 3 .69 RPM |
| bodymap2_breast | 17 .32 RPM |
| bodymap2_adipose | 9 .06 RPM |
| bodymap2_adrenal | 22 .03 RPM |
| bodymap2_skeletal_muscle | 6 .17 RPM |
| bodymap2_thyroid | 18 .57 RPM |
| bodymap2_prostate | 15 .74 RPM |
| bodymap2_colon | 4 .58 RPM |
| bodymap2_testis | 19 .31 RPM |
| bodymap2_brain | 8 .84 RPM |
| bodymap2_heart | 13 .81 RPM |
| bodymap2_white_blood_cells | 22 .56 RPM |
| bodymap2_lymph_node | 15 .86 RPM |
| bodymap2_ovary | 20 .14 RPM |
| bodymap2_kidney | 25 .93 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000000355 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000000818 | ortholog_one2many | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000005970 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000003443 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000008114 | ortholog_one2one | 2 retrogenes | |
| Microcebus murinus | ENSMICG00000010696 | ortholog_one2one | 4 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000010322 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000005194 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000000851 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000001301 | ortholog_one2one | 2 retrogenes | |
| Tupaia belangeri | ENSTBEG00000003352 | ortholog_one2one | 2 retrogenes | |
| Tarsius syrichta | ENSTSYG00000005739 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_978 | 95.86 | 60.42 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_1569 | 92.95 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000159445 retrocopies