Parental gene:

THEM4, ENSOCUG00000005194

Aliases:None
Description:thioesterase superfamily member 4 [Source:HGNC Symbol;Acc:17947]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:13:40286173..40306939(+)


>ENSOCUG00000005194
ATGCTGAGGAGCTGCGCCGCGCGCCTGCGCACCCTCGGGGCCGTGCCGGGACCCGCGCGGCTCACCTTAGTGCCAGCGCC
TTACTCATCACCTGTGCTTAGGTCATTTTCTTCTGAGAAAGCCACTCAAAAGGACTATTCACTCCCTAACCCCAGCTGGA
CCAAGGACATAAGACTCCTTTATGACCAGTTCATGAAGAAATGTGAAGATGGCTCCTGGAAACGTTTGCCTTCATATAAA
TGTAAGTCTACTCAAAGGGTTCAAAACTTCAGGAACCTTTTTCTTGATACAAAGTTTGTGGAAGAACAAACGCCAAAGGC
TCAGATCTTCACAAGAAGCCTTGAGGAAGGCCTGGGCTTCGAATATGTGATGTTCCATAATGAAGCTGAGAAAAGAGTAG
TTTGTGTTTTCCAAGGAGGTCCTCATCTGCAAGGAAACCATGGATACGTTCATGGAGGTGCCATTGCAACCATGATTGAT
ATTACAGCTGGTACATGTGCAGTTTTAACTGGAGGATATGCCATGACTGCCAATCTAAACATCAATTTTAGAAGACCTAT
CCCCCTTTGTTCTGTTGTTGTGATAAACAGCCAAATTGATAAAATTGAAGGAAGGAAATATTTTATTTCCTGTGATATTC
GCAGTGTTGATGAGAAGACGCTTTACTCAGAGGCCACGACATTTCTGGTAAAAGTGTACTTGCCAAAATCTACTGAA

Library Parental gene expression (RPM)
SRP017611_liver 1 .54 RPM
SRP017611_kidney 5 .88 RPM
SRP017611_brain 3 .15 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000000355 ortholog_one2one 1 retrogene
retro_amel_1301,
Choloepus hoffmanni ENSCHOG00000000818 ortholog_one2many 1 retrogene
retro_chof_841,
Dasypus novemcinctus ENSDNOG00000005970 ortholog_one2one 1 retrogene
retro_dnov_710,
Felis catus ENSFCAG00000003443 ortholog_one2one 1 retrogene
retro_fcat_387,
Homo sapiens ENSG00000159445 ortholog_one2one 2 retrogenes
retro_hsap_1569, retro_hsap_978,
Gorilla gorilla ENSGGOG00000008114 ortholog_one2one 2 retrogenes
retro_ggor_1195, retro_ggor_782,
Microcebus murinus ENSMICG00000010696 ortholog_one2one 4 retrogenes
retro_mmur_1241, retro_mmur_1436, retro_mmur_1505, retro_mmur_1574,
Nomascus leucogenys ENSNLEG00000010322 ortholog_one2one 1 retrogene
retro_nleu_1737,
Pongo abelii ENSPPYG00000000851 ortholog_one2one 1 retrogene
retro_pabe_1295,
Pan troglodytes ENSPTRG00000001301 ortholog_one2one 2 retrogenes
retro_ptro_1056, retro_ptro_768,
Tupaia belangeri ENSTBEG00000003352 ortholog_one2one 2 retrogenes
retro_tbel_2412, retro_tbel_3266,
Tarsius syrichta ENSTSYG00000005739 ortholog_one2one 1 retrogene
retro_tsyr_579,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_1341 94.85 56.90
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Download FASTA sequences of all ENSOCUG00000005194 retrocopies