Parental gene:

NIPAL1, ENSG00000163293

Aliases:None
Description:NIPA-like domain containing 1 [Source:HGNC Symbol;Acc:27194]
Organism:Human (Homo sapiens)
Coordinates:4:47916158..48042188(+)


>ENSG00000163293
ATGGGGGCACAGGTGAGGCTGCCGCCCGGAGAGCCCTGCCGAGAAGGATATGTGCTGTCTCTGGTCTGTCCAAACTCCTC
CCAGGCTTGGTGTGAGATCACAAATGTGTCACAGCTGCTGGCTTCTCCTGTGCTCTACACGGACCTGAATTACAGCATAA
ACAACTTGAGCATTTCAGCAAATGTAGAAAACAAATACAGTCTTTATGTGGGCTTGGTACTGGCAGTAAGCTCAAGTATT
TTTATTGGCTCCAGCTTCATACTGAAAAAGAAGGGCCTCTTGCAACTGGCCAGCAAGGGCTTTACTAGAGCTGGACAAGG
TGGACATTCTTACCTGAAGGAATGGCTCTGGTGGGTAGGATTGCTGTCAATGGGAGCAGGAGAGGCTGCAAATTTTGCTG
CTTATGCTTTTGCACCTGCCACCTTGGTCACCCCTCTGGGTGCTTTGAGTGTTCTCATAAGTGCAATATTATCTTCCTAC
TTTTTAAACGAGCACTTGAACATTCATGGGAAAATAGGCTGCATATTAAGTATATTGGGGTCAACTGTGATGGTTATCCA
TGCCCCACAAGAAGAGGAAGTCACATCTTTGCATGAAATGGAAATGAAATTGAGAGACCCAGGGTTTATTTCCTTTGCTG
TGATCATAACTGTGATCTCCTTGGTGCTGATTTTGATTGTGGCTCCCAAGAAAGGACAGACCAATATATTGGTTTATATT
TCAATCTGTTCCTTGATTGGAGCGTTTTCAGTTTCTTCTGTGAAAGGCCTGGGAATTGCCATTAAGGAGCTGATAGAATG
GAAGCCAGTTTACAAACATCCGCTGGTCTTTGTTTTGCTGGCTGTACTTGTGCTTTCAGTAACTACACAGATTAACTATC
TCAACAAGGCACTGGACACCTTTAATACCTCTCTTGTGACACCCATTTATTATGTATTCTTCACATCCATGGTAGTGACT
TGCTCTGCCATCTTATTCCAAGAGTGGTATGGCATGACAGCTGGAGATATCATTGGGACCCTGAGTGGATTCTTCACTAT
TATCATTGGCATCTTCCTTCTACATGCTTTTAAAAATACTGACATTACTTGGAGTGAGCTTACATCCACTGCTAAGAAAG
AAGCCGTCTCTCTGAATGTCAATGAAAACAATTATGTTTTACTAGAGAACTTGGAGTGTTCAGCCCCAGGATACAATGAT
GACGTTACCTTGTTTAGTAGAACTGATGACTGA

Library Parental gene expression (RPM)
bodymap2_liver 8 .11 RPM
bodymap2_lung 0 .93 RPM
bodymap2_breast 1 .73 RPM
bodymap2_adipose 0 .74 RPM
bodymap2_adrenal 0 .61 RPM
bodymap2_skeletal_muscle 0 .36 RPM
bodymap2_thyroid 8 .38 RPM
bodymap2_prostate 10 .32 RPM
bodymap2_colon 3 .62 RPM
bodymap2_testis 2 .77 RPM
bodymap2_brain 0 .52 RPM
bodymap2_heart 0 .06 RPM
bodymap2_white_blood_cells 0 .14 RPM
bodymap2_lymph_node 0 .38 RPM
bodymap2_ovary 1 .75 RPM
bodymap2_kidney 13 .13 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000002047 ortholog_one2one 1 retrogene
retro_dnov_2048,
Gorilla gorilla ENSGGOG00000009006 ortholog_one2one 1 retrogene
retro_ggor_1533,
Macaca mulatta ENSMMUG00000018625 ortholog_one2one 1 retrogene
retro_mmul_638,
Nomascus leucogenys ENSNLEG00000017377 ortholog_one2one 1 retrogene
retro_nleu_2814,
Pongo abelii ENSPPYG00000014714 ortholog_one2one 1 retrogene
retro_pabe_1810,
Pan troglodytes ENSPTRG00000016038 ortholog_one2one 1 retrogene
retro_ptro_1422,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_2463 80.78 80.00
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Download FASTA sequences of all ENSG00000163293 retrocopies