Parental gene:

NIPAL1, ENSMMUG00000018625

Aliases:None
Description:NIPA-like domain containing 1 [Source:HGNC Symbol;Acc:27194]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:5:43288750..43308443(+)


>ENSMMUG00000018625
ATGGGGGCACAGGTGAGGCTGCCGCCTGGAGAGCCCTGCCAAGAAGGATATGTGCTGTCTCTGGTCTGTCCAAACTCCTT
CCAGGCTTGGTGTGAGATCACAAATGTGTCACAGCTGCTGGCTTCTCCTGTGCTCTACACGGACCTGAATTCCAGCATAA
ACAACTTGAGCATTTCAGCAAATGTAGAAAACAAATACAGTCTTTATGTGGGCTTGGTACTGGCAGTAAGTTCAAGTATT
TTTATTGGCTCCAGCTTCATCCTGAAAAAGAAGGGCCTCTTGCAACTGGCCAGCAAGGGTGTTACTAGAGCTGGACAAGG
TGGACATTCTTACCTGAAGGAATGGCTCTGGTGGGTAGGATTGCTGTCAATGGGAGCAGGAGAAGCTGCAAATTTTGCTG
CTTATGCTTTTGCACCTGCCACCTTGGTCACCCCTCTGGGTGCTCTGAGTGTTCTTATAAGTGCAATATTATCTTCCTAC
TTTTTAAACGAACACTTGAACATTCATGGGAAAATAGGCTGCATATTAAGTATATTGGGGTCAACTGTGATGGTTATCCA
TGCCCCACAAGAAGAGGAAGTCACATCTTTGCATGAAATGGAAATGAAATTGAGAGACCCAGGGTTTATTTCTTTTGCTG
TGATCATAACTGTGATCTCCTTGGTGCTGATTTTGATTGTGGCTCCAAAGAAAGGACAGACCAATATATTGGTTTATATT
TCAATCTGTTCCTTGATTGGAGCGTTTTCAGTTTCTTCTGTCAAAGGCCTGGGAATTGCCATTAAGGAGCTGATAGAATG
GAAGCCAGTTTACAAACATCCTCTGGTCTTTGTTTTGCTGGCTGTACTTGTGCTTTCAGTAACTACACAGATTAACTATC
TCAACAAGGCACTGGACACCTTTAATACCTCTCTTGTGACACCCATTTATTATGTATTCTTCACATCCATGGTAGTCACT
TGCTCTGCCGTCTTATTCCAAGAGTGGTATGGCATGACAGCTGGAGACATCATTGGGACCCTGAGTGGATTCTTCACTAT
TATCATTGGCATCTTCCTTCTACATGCTTTTAAAAATACTGACATTACTTGGAGTGAGCTTACATCCACTGCTAAGAAAG
AAGCCATCTCTCTGAATGTCAATGAAAACAATTATGTTTTACTAGAGAACTTGGAGTGTTCAGCCCCGGGATACAATGAT
GACGTTACCTTGTTTAGTAGAACTGATGACTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 0 .08 RPM
SRP007412_brain 0 .00 RPM
SRP007412_cerebellum 0 .00 RPM
SRP007412_heart 1 .06 RPM
SRP007412_kidney 2 .11 RPM
SRP007412_liver 3 .44 RPM
SRP007412_testis 0 .19 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000002047 ortholog_one2one 1 retrogene
retro_dnov_2048,
Homo sapiens ENSG00000163293 ortholog_one2one 1 retrogene
retro_hsap_2463,
Gorilla gorilla ENSGGOG00000009006 ortholog_one2one 1 retrogene
retro_ggor_1533,
Macaca mulatta ENSMMUG00000003892 within_species_paralog 1 retrogene
retro_mmul_1510,
Nomascus leucogenys ENSNLEG00000017377 ortholog_one2one 1 retrogene
retro_nleu_2814,
Pongo abelii ENSPPYG00000014714 ortholog_one2one 1 retrogene
retro_pabe_1810,
Pan troglodytes ENSPTRG00000016038 ortholog_one2one 1 retrogene
retro_ptro_1422,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_638 79.38 85.37
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Download FASTA sequences of all ENSMMUG00000018625 retrocopies