Parental gene:

PIGA, ENSG00000165195

Aliases:PIGA, GPI3, MCAHS2, PIG-A
Description:phosphatidylinositol glycan anchor biosynthesis, class A [Source:HGNC Symbol;Acc:8957]
Organism:Human (Homo sapiens)
Coordinates:X:15337572..15353676(-)


>ENSG00000165195
ATGGCCTGTAGAGGAGGAGCTGGGAATGGCCACCGTGCCTCAGCTACACTCTCTCGGGTTAGCCCTGGAAGTCTTTACAC
ATGTAGAACCCGTACCCATAATATATGCATGGTATCTGACTTTTTCTACCCAAATATGGGAGGCGTGGAAAGCCACATTT
ACCAGCTCTCTCAGTGCCTGATTGAAAGAGGGCATAAGGTTATAATTGTCACCCATGCTTATGGAAATCGAAAAGGCATC
CGTTACCTCACCAGTGGCCTCAAAGTCTATTACTTGCCTCTGAAAGTCATGTACAACCAGTCTACAGCCACGACCCTCTT
TCACAGTCTGCCATTGCTCAGGTACATATTTGTTCGGGAGAGAGTCACGATAATCCATTCACATAGTTCTTTTTCTGCTA
TGGCCCATGATGCTCTCTTCCACGCCAAGACAATGGGGCTTCAGACAGTCTTCACGGACCATTCCCTTTTTGGATTTGCT
GATGTCAGCTCGGTGCTTACAAACAAGCTTCTAACCGTGTCTCTTTGTGATACAAACCACATCATTTGTGTGTCTTATAC
TAGTAAGGAAAATACTGTACTAAGAGCAGCACTGAATCCTGAAATAGTGTCCGTCATTCCTAATGCTGTAGATCCTACTG
ACTTCACTCCAGACCCATTTAGAAGGCATGATAGTATAACTATTGTTGTTGTCAGCAGACTTGTTTACAGAAAAGGGATC
GATTTGCTTAGTGGTATAATACCTGAACTCTGTCAGAAATATCCAGATTTAAATTTCATAATTGGAGGAGAGGGACCAAA
GAGAATCATTTTGGAAGAAGTTCGGGAAAGATACCAGCTGCATGACAGGGTGCGTCTTTTGGGAGCTTTAGAACACAAGG
ATGTTAGAAATGTCTTAGTTCAAGGACATATTTTTCTGAATACCTCCCTTACTGAAGCATTCTGCATGGCGATCGTGGAA
GCAGCCAGTTGTGGTTTACAGGTTGTAAGTACCAGAGTTGGTGGAATTCCTGAGGTGCTTCCAGAAAACCTTATTATTTT
ATGTGAGCCTTCAGTAAAATCTTTGTGTGAAGGATTGGAAAAGGCTATTTTCCAACTGAAGTCAGGGACATTGCCAGCTC
CAGAAAACATCCATAACATAGTAAAGACTTTCTACACCTGGAGGAATGTTGCAGAAAGAACTGAAAAGGTATATGACCGG
GTATCAGTGGAAGCTGTGTTGCCAATGGACAAACGACTGGACAGACTTATTTCTCACTGCGGCCCAGTAACAGGCTACAT
CTTTGCTTTGTTGGCAGTTTTCAACTTCCTCTTCCTCATTTTCTTGAGATGGATGACTCCAGATTCTATCATTGATGTTG
CAATAGATGCCACTGGGCCACGGGGTGCCTGGACTAATAACTATTCTCACAGTAAAAGAGGGGGTGAGAATAATGAGATA
TCTGAAACCAGGTAG

Library Parental gene expression (RPM)
bodymap2_liver 6 .76 RPM
bodymap2_lung 35 .21 RPM
bodymap2_breast 10 .78 RPM
bodymap2_adipose 10 .69 RPM
bodymap2_adrenal 10 .58 RPM
bodymap2_skeletal_muscle 6 .11 RPM
bodymap2_thyroid 14 .18 RPM
bodymap2_prostate 12 .90 RPM
bodymap2_colon 4 .02 RPM
bodymap2_testis 11 .52 RPM
bodymap2_brain 24 .52 RPM
bodymap2_heart 5 .59 RPM
bodymap2_white_blood_cells 10 .77 RPM
bodymap2_lymph_node 11 .46 RPM
bodymap2_ovary 10 .68 RPM
bodymap2_kidney 16 .32 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000006415 ortholog_one2one 1 retrogene
retro_chof_2311,
Gorilla gorilla ENSGGOG00000007293 ortholog_one2one 1 retrogene
retro_ggor_828,
Nomascus leucogenys ENSNLEG00000009352 ortholog_one2one 1 retrogene
retro_nleu_2070,
Ochotona princeps ENSOPRG00000015381 ortholog_one2one 1 retrogene
retro_opri_1065,
Pongo abelii ENSPPYG00000020142 ortholog_one2one 1 retrogene
retro_pabe_876,
Pan troglodytes ENSPTRG00000021684 ortholog_one2one 1 retrogene
retro_ptro_716,
Rattus norvegicus ENSRNOG00000003554 ortholog_one2one 1 retrogene
retro_rnor_2566,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_1050 86.01 100.00
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Download FASTA sequences of all ENSG00000165195 retrocopies