Parental gene:

PIGA, ENSPPYG00000020142

Aliases:None
Description:phosphatidylinositol glycan anchor biosynthesis, class A [Source:HGNC Symbol;Acc:8957]
Organism:Orangutan (Pongo abelii)
Coordinates:X:15278648..15291210(-)


>ENSPPYG00000020142
ATGGCCCGTAGAGGAGGAGCTGGGGATGGCCATCGTGCCTCAGCTACACTGTCTCGGGTTAGCCCTGGAAGTCTTTACAC
ATGTAGAACCCATACCCATAATATATGCATGGTATCTGACTTTTTCTACCCAAATATGGGAGGCGTGGAAAGCCACATTT
ACCAGCTCTCTCAGTGCCTGATTGAAAGAGGGCACAAAGTTATAATTGTCACCCATGCTTATGGAAATCGAAAAGGCATC
CGTTACCTCACCAATGGCCTCAAAGTCTATTACTTGCCTCTGAAAGTCATGTACAACCAGTCTACAGCCACGACCCTCTT
TCACAGTCTGCCACTGCTCAGGTACATATTTGTTCGGGAGAGAGTCACGATAATCCATTCACATAGTTCTTTTTCTGCTA
TGGCCCATGATGCTCTCTTCCACGCCAAGACAATGGGGCTTCAGACAGTCTTCACGGACCATTCCCTTTTTGGATTTGCT
GATGTCAGCTCGGTGCTTACAAACAAGCTTCTAACCGTGTCTCTTTGTGATACAAACCACATCATTTGTGTGTCTTATAC
TAGTAAGGAAAATACTGTACTAAGAGCAGCACTGAATCCTGAAATAGTGTCCGTCATTCCTAATGCTGTAGATCCTACTG
ACTTCACTCCAGACCCATTTAGAAGGCATGATAGTATAACTATTGTTGTTGTCAGCAGACTTGTTTACAGAAAAGGGATC
GATTTGCTTAGTGGTATAATACCTGAACTCTGTCAGAAATATCCAGATTTAAATTTCATAATTGGAGGAGAGGGACCAAA
GAGAATCGTTTTGGAAGAAGTTCGGGAAAGATACCAGCTGCATGACAGGGTGCGTCTTTTGGGAGCTTTAGAACACAAGG
ATGTTAGAAATGTCTTAGTTCAAGGACATATTTTTCTGAATACCTCCCTTACTGAAGCATTCTGCATGGCGATCGTGGAA
GCAGCCAGTTGTGGTTTACAGGTTGTAAGTACCAGAGTTGGTGGAATTCCTGAGGTGCTTCCAGAAAACCTTATTATTTT
ATGTGAGCCTTCAGTAAAATCTTTGTGTGAAGGATTGGAAAGGGCTATTTTCCAACTGAAGTCAGGGACATTGCCGGCTC
CAGAAAACATCCATAACATAGTAAAGACTTTCTACACCTGGAGGAATGTTGCGGAAAGAACTGAAAAGGTATATGACCGG
GTATCAGTGGAAGCTGTGTTGCCAATGGACAAACGACTGGACAGACTTATTTCTCACTGTGGCCCAGTAACAGGCTACAT
CTTTGCTTTGTTGGCAGTTTTCAACTTCCTCTTCCTCATTTTCTTGAGATGGATGACTCCAGATTCTATCATTGATGTTG
CAGTAGATGCCACTGGGCCACGGAGTGCCTGGACTAATAACTGTTCTCACAGTAAAAGAGGGAGTGAGAATAATGAGATA
TCTGAAACCAGGTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 3 .04 RPM
SRP007412_cerebellum 9 .61 RPM
SRP007412_heart 2 .20 RPM
SRP007412_kidney 5 .83 RPM
SRP007412_liver 3 .76 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000006415 ortholog_one2one 1 retrogene
retro_chof_2311,
Homo sapiens ENSG00000165195 ortholog_one2one 1 retrogene
retro_hsap_1050,
Gorilla gorilla ENSGGOG00000007293 ortholog_one2one 1 retrogene
retro_ggor_828,
Nomascus leucogenys ENSNLEG00000009352 ortholog_one2one 1 retrogene
retro_nleu_2070,
Ochotona princeps ENSOPRG00000015381 ortholog_one2one 1 retrogene
retro_opri_1065,
Pan troglodytes ENSPTRG00000021684 ortholog_one2one 1 retrogene
retro_ptro_716,
Rattus norvegicus ENSRNOG00000003554 ortholog_one2one 1 retrogene
retro_rnor_2566,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_876 82.09 100.00
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSPPYG00000020142 retrocopies