Parental gene:

STIP1, ENSG00000168439

Aliases:STIP1, HEL-S-94n, HOP, IEF-SSP-3521, P60, STI1, STI1L
Description:stress-induced-phosphoprotein 1 [Source:HGNC Symbol;Acc:11387]
Organism:Human (Homo sapiens)
Coordinates:11:63952743..63972015(+)


>ENSG00000168439
ATGGAGCAGGTCAATGAGCTGAAGGAGAAAGGCAACAAGGCCCTGAGCGTGGGTAACATCGATGATGCCTTACAGTGCTA
CTCCGAAGCTATTAAGCTGGATCCCCACAACCACGTGCTGTACAGCAACCGTTCTGCTGCCTATGCCAAGAAAGGAGACT
ACCAGAAGGCTTATGAGGATGGCTGCAAGACTGTCGACCTAAAGCCTGACTGGGGCAAGGGCTATTCACGAAAAGCAGCA
GCTCTAGAGTTCTTAAACCGCTTTGAAGAAGCCAAGCGAACCTATGAGGAGGGCTTAAAACACGAGGCAAATAACCCTCA
ACTGAAAGAGGGTTTACAGAATATGGAGGCCAGGTTGGCAGAGAGAAAATTCATGAACCCTTTCAACATGCCTAATCTGT
ATCAGAAGTTGGAGAGTGATCCCAGGACAAGGACACTACTCAGTGATCCTACCTACCGGGAGCTGATAGAGCAGCTACGA
AACAAGCCTTCTGACCTGGGCACGAAACTACAAGATCCCCGGATCATGACCACTCTCAGCGTCCTCCTTGGGGTCGATCT
GGGCAGTATGGATGAGGAGGAAGAGATTGCAACACCTCCACCACCACCCCCTCCCAAAAAGGAGACCAAGCCAGAGCCAA
TGGAAGAAGATCTTCCAGAGAATAAGAAGCAGGCACTGAAAGAAAAAGAGCTGGGGAACGATGCCTACAAGAAGAAAGAC
TTTGACACAGCCTTGAAGCATTACGACAAAGCCAAGGAGCTGGACCCCACTAACATGACTTACATTACCAATCAAGCAGC
GGTATACTTTGAAAAGGGCGACTACAATAAGTGCCGGGAGCTTTGTGAGAAGGCCATTGAAGTGGGGAGAGAAAACCGAG
AAGACTATCGACAGATTGCCAAAGCATATGCTCGAATTGGCAACTCCTACTTCAAAGAAGAAAAGTACAAGGATGCCATC
CATTTCTATAACAAGTCTCTGGCAGAGCACCGAACCCCAGATGTGCTCAAGAAATGCCAGCAGGCAGAGAAAATCCTGAA
GGAGCAAGAGCGGCTGGCCTACATAAACCCCGACCTGGCTTTGGAGGAGAAGAACAAAGGCAACGAGTGTTTTCAGAAAG
GGGACTATCCCCAGGCCATGAAGCATTATACAGAAGCCATCAAAAGGAACCCGAAAGATGCCAAATTATACAGCAATCGA
GCTGCCTGCTACACCAAACTCCTGGAGTTCCAGCTGGCACTCAAGGACTGTGAGGAATGTATCCAGCTGGAGCCGACCTT
CATCAAGGGTTATACACGGAAAGCCGCTGCGCTGGAAGCGATGAAGGACTACACCAAAGCCATGGATGTGTACCAGAAGG
CGCTAGACCTGGACTCCAGCTGTAAGGAGGCGGCAGACGGCTACCAGCGCTGTATGATGGCGCAGTACAACCGGCACGAC
AGCCCCGAAGATGTGAAGCGACGAGCCATGGCCGACCCTGAGGTGCAGCAGATCATGAGTGACCCAGCCATGCGCCTTAT
CCTGGAACAGATGCAGAAGGACCCCCAGGCACTCAGCGAACACTTAAAGAATCCTGTAATAGCACAGAAGATCCAGAAGC
TGATGGATGTGGGTCTGATTGCAATTCGGTGA

Library Parental gene expression (RPM)
bodymap2_liver 36 .35 RPM
bodymap2_lung 121 .92 RPM
bodymap2_breast 64 .81 RPM
bodymap2_adipose 80 .98 RPM
bodymap2_adrenal 64 .25 RPM
bodymap2_skeletal_muscle 152 .38 RPM
bodymap2_thyroid 194 .02 RPM
bodymap2_prostate 116 .46 RPM
bodymap2_colon 225 .98 RPM
bodymap2_testis 255 .70 RPM
bodymap2_brain 77 .96 RPM
bodymap2_heart 52 .26 RPM
bodymap2_white_blood_cells 88 .52 RPM
bodymap2_lymph_node 216 .43 RPM
bodymap2_ovary 177 .44 RPM
bodymap2_kidney 124 .74 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000015663 ortholog_one2many 2 retrogenes
retro_btau_836, retro_btau_913,
Canis familiaris ENSCAFG00000014672 ortholog_one2one 6 retrogenes
retro_cfam_1077, retro_cfam_1172, retro_cfam_1722, retro_cfam_1982, retro_cfam_474, retro_cfam_497,
Callithrix jacchus ENSCJAG00000018209 ortholog_one2one 2 retrogenes
retro_cjac_1043, retro_cjac_2222,
Cavia porcellus ENSCPOG00000002914 ortholog_one2one 1 retrogene
retro_cpor_1443,
Felis catus ENSFCAG00000005937 ortholog_one2one 1 retrogene
retro_fcat_1510,
Gorilla gorilla ENSGGOG00000012132 ortholog_one2one 1 retrogene
retro_ggor_3040,
Microcebus murinus ENSMICG00000016933 ortholog_one2one 1 retrogene
retro_mmur_1045,
Macaca mulatta ENSMMUG00000012953 ortholog_one2one 1 retrogene
retro_mmul_2607,
Nomascus leucogenys ENSNLEG00000004777 ortholog_one2one 1 retrogene
retro_nleu_2000,
Pan troglodytes ENSPTRG00000003820 ortholog_one2one 1 retrogene
retro_ptro_3242,
Rattus norvegicus ENSRNOG00000021164 ortholog_one2one 2 retrogenes
retro_rnor_2862, retro_rnor_468,
Ictidomys tridecemlineatus ENSSTOG00000014262 ortholog_one2one 1 retrogene
retro_itri_1578,
Tursiops truncatus ENSTTRG00000010235 ortholog_one2one 1 retrogene
retro_ttru_1900,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_4867 86.11 100.00
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Download FASTA sequences of all ENSG00000168439 retrocopies