Parental gene: | E2F6, ENSG00000169016 |
| Aliases: | E2F6, E2F-6 |
| Description: | E2F transcription factor 6 [Source:HGNC Symbol;Acc:3120] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 2:11584500..11606297(-) |
>ENSG00000169016
ATGAGTCAGCAGCGGCCGGCGAGGAAGTTACCCAGTCTCCTCCTGGACCCGACGGAGGAGACGGTTCGCCGTCGGTGCCG
AGACCCCATCAACGTGGAGGGCCTGCTGCCATCAAAAATAAGGATTAATTTAGAAGATAATGTACAATATGTGTCCATGA
GAAAAGCTCTAAAAGTGAAGAGACCTCGTTTTGATGTATCGCTGGTTTATTTAACTCGAAAATTTATGGATCTTGTCAGA
TCTGCTCCCGGGGGTATTCTTGACTTAAACAAGGTTGCAACGAAACTGGGAGTCCGAAAGCGGAGAGTGTATGACATCAC
CAATGTCTTAGATGGAATCGACCTCGTTGAAAAGAAATCCAAGAACCATATTAGATGGATAGGATCTGATCTTAGCAATT
TTGGAGCAGTTCCCCAACAAAAGAAGCTACAGGAGGAACTTTCTGACTTATCAGCAATGGAAGATGCTTTGGATGAGTTA
ATTAAGGATTGTGCTCAGCAGCTGTTTGAGTTAACAGATGACAAAGAAAATGAAAGACTAGCATATGTGACCTATCAAGA
CATTCATAGCATTCAGGCCTTCCATGAACAGATCGTCATTGCAGTTAAAGCTCCAGCAGAAACCAGATTGGATGTTCCAG
CTCCCAGAGAAGACTCTATCACAGTGCACATAAGGAGCACCAACGGACCTATCGATGTCTATTTGTGTGAAGTGGAGCAG
GGTCAGACCAGTAACAAAAGGTCTGAAGGTGTCGGGACCTCTTCATCTGAGAGCACTCATCCAGAAGGCCCTGAGGAAGA
AGAAAATCCTCAGCAAAGTGAAGAATTGCTTGAAGTAAGCAACTGA
ATGAGTCAGCAGCGGCCGGCGAGGAAGTTACCCAGTCTCCTCCTGGACCCGACGGAGGAGACGGTTCGCCGTCGGTGCCG
AGACCCCATCAACGTGGAGGGCCTGCTGCCATCAAAAATAAGGATTAATTTAGAAGATAATGTACAATATGTGTCCATGA
GAAAAGCTCTAAAAGTGAAGAGACCTCGTTTTGATGTATCGCTGGTTTATTTAACTCGAAAATTTATGGATCTTGTCAGA
TCTGCTCCCGGGGGTATTCTTGACTTAAACAAGGTTGCAACGAAACTGGGAGTCCGAAAGCGGAGAGTGTATGACATCAC
CAATGTCTTAGATGGAATCGACCTCGTTGAAAAGAAATCCAAGAACCATATTAGATGGATAGGATCTGATCTTAGCAATT
TTGGAGCAGTTCCCCAACAAAAGAAGCTACAGGAGGAACTTTCTGACTTATCAGCAATGGAAGATGCTTTGGATGAGTTA
ATTAAGGATTGTGCTCAGCAGCTGTTTGAGTTAACAGATGACAAAGAAAATGAAAGACTAGCATATGTGACCTATCAAGA
CATTCATAGCATTCAGGCCTTCCATGAACAGATCGTCATTGCAGTTAAAGCTCCAGCAGAAACCAGATTGGATGTTCCAG
CTCCCAGAGAAGACTCTATCACAGTGCACATAAGGAGCACCAACGGACCTATCGATGTCTATTTGTGTGAAGTGGAGCAG
GGTCAGACCAGTAACAAAAGGTCTGAAGGTGTCGGGACCTCTTCATCTGAGAGCACTCATCCAGAAGGCCCTGAGGAAGA
AGAAAATCCTCAGCAAAGTGAAGAATTGCTTGAAGTAAGCAACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 6 .40 RPM |
| bodymap2_lung | 8 .90 RPM |
| bodymap2_breast | 10 .29 RPM |
| bodymap2_adipose | 9 .86 RPM |
| bodymap2_adrenal | 12 .65 RPM |
| bodymap2_skeletal_muscle | 15 .75 RPM |
| bodymap2_thyroid | 19 .30 RPM |
| bodymap2_prostate | 11 .57 RPM |
| bodymap2_colon | 8 .64 RPM |
| bodymap2_testis | 19 .66 RPM |
| bodymap2_brain | 11 .88 RPM |
| bodymap2_heart | 17 .89 RPM |
| bodymap2_white_blood_cells | 8 .78 RPM |
| bodymap2_lymph_node | 10 .60 RPM |
| bodymap2_ovary | 18 .51 RPM |
| bodymap2_kidney | 10 .57 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000048286 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000006910 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000000258 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000112242 | within_species_paralog | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000007957 | ortholog_one2one | 4 retrogenes | |
| Myotis lucifugus | ENSMLUG00000003384 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000023225 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000014134 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000012646 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000011661 | ortholog_one2one | 2 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000003316 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_2542 | 98.02 | 98.06 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_2547 | 97.52 | 81.12 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_hsap_2572 | 97.03 | 71.89 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_hsap_4906 | 54.29 | 86.83 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000169016 retrocopies